SnpEff: Variant analysis

Contents Summary
Variant rate by chromosome
Variants by type
Number of variants by impact
Number of variants by functional class
Number of variants by effect
Quality histogram
InDel length histogram
Base variant table
Transition vs transversions (ts/tv)
Allele frequency
Allele Count
Codon change table
Amino acid change table
Chromosome variants plots
Details by gene

Summary

Genome BDGP6.86

Date 2026-03-26 14:19

SnpEff version
SnpEff 4.3t (build 2017-11-24 10:18), by Pablo Cingolani

Command line arguments
SnpEff -formatEff BDGP6.86 /project/berglandlab/DEST/snape/dest.PoolSeq.SNAPE.001.50.03Dec2024_DACtest.norep.ann.vcf.gz

Warnings 2,277,429

Errors 0

Number of lines (input file) 32,607,992

Number of variants (before filter) 37,947,871

Number of not variants
(i.e. reference equals alternative) 0

Number of variants processed
(i.e. after filter and non-variants) 37,947,871

Number of known variants
(i.e. non-empty ID) 0 ( 0% )

Number of multi-allelic VCF entries
(i.e. more than two alleles) 5,005,815

Number of effects 228,179,151

Genome total length 143,725,995

Genome effective length 132,532,477

Variant rate 1 variant every 3 bases

Variants rate details

Chromosome Length Variants Variants rate

2L 23,513,712 7,730,378 3

2R 25,286,936 7,400,499 3

3L 28,110,227 8,276,769 3

3R 32,079,331 10,014,985 3

X 23,542,271 4,525,240 5

Total 132,532,477 37,947,871 3

Chromosome	Length	Variants	Variants rate
2L	23,513,712	7,730,378	3
2R	25,286,936	7,400,499	3
3L	28,110,227	8,276,769	3
3R	32,079,331	10,014,985	3
X	23,542,271	4,525,240	5
Total	132,532,477	37,947,871	3

Number variants by type

Type Total

SNP 37,947,871

MNP 0

INS 0

DEL 0

MIXED 0

INV 0

DUP 0

BND 0

INTERVAL 0

Total 37,947,871

Type	Total
SNP	37,947,871
MNP	0
INS	0
DEL	0
MIXED	0
INV	0
DUP	0
BND	0
INTERVAL	0
Total	37,947,871

Number of effects by impact

Type (alphabetical order) Count Percent

HIGH 1,213,584 0.532%

LOW 7,813,379 3.424%

MODERATE 16,207,390 7.103%

MODIFIER 202,944,798 88.941%

Type (alphabetical order)	Count	Percent
HIGH	1,213,584	0.532%
LOW	7,813,379	3.424%
MODERATE	16,207,390	7.103%
MODIFIER	202,944,798	88.941%

Number of effects by functional class

Type (alphabetical order) Count Percent

MISSENSE 16,264,932 67.913%

NONSENSE 979,650 4.09%

SILENT 6,705,078 27.997%

Type (alphabetical order)	Count	Percent
MISSENSE	16,264,932	67.913%
NONSENSE	979,650	4.09%
SILENT	6,705,078	27.997%

Missense / Silent ratio: 2.4258

Number of effects by type and region

Type Region

Type (alphabetical order) Count Percent

3_prime_UTR_variant 4,644,214 2.025%

5_prime_UTR_premature_start_codon_gain_variant 377,609 0.165%

5_prime_UTR_variant 3,071,809 1.34%

downstream_gene_variant 57,657,359 25.145%

initiator_codon_variant 11,404 0.005%

intergenic_region 9,631,748 4.2%

intron_variant 70,046,145 30.548%

missense_variant 16,207,390 7.068%

non_canonical_start_codon 2 0%

non_coding_transcript_exon_variant 1,008,527 0.44%

rare_amino_acid_variant 6 0%

splice_acceptor_variant 73,335 0.032%

splice_donor_variant 114,450 0.05%

splice_region_variant 995,487 0.434%

start_lost 18,332 0.008%

stop_gained 979,646 0.427%

stop_lost 27,815 0.012%

stop_retained_variant 4,415 0.002%

synonymous_variant 6,700,658 2.922%

upstream_gene_variant 57,731,996 25.177%

Type (alphabetical order) Count Percent

DOWNSTREAM 57,657,359 25.268%

EXON 24,882,374 10.905%

INTERGENIC 9,631,748 4.221%

INTRON 69,205,929 30.33%

SPLICE_SITE_ACCEPTOR 73,335 0.032%

SPLICE_SITE_DONOR 114,450 0.05%

SPLICE_SITE_REGION 788,328 0.345%

UPSTREAM 57,731,996 25.301%

UTR_3_PRIME 4,644,214 2.035%

UTR_5_PRIME 3,449,418 1.512%

Quality:

Insertions and deletions length:

Base changes (SNPs)

A C G T

A 0 3,894,805 2,002,590 5,876,260

C 3,454,349 0 834,490 3,086,997

G 3,945,990 876,133 0 2,350,438

T 7,438,191 1,812,127 2,375,501 0

	A	C	G	T
A	0	3,894,805	2,002,590	5,876,260
C	3,454,349	0	834,490	3,086,997
G	3,945,990	876,133	0	2,350,438
T	7,438,191	1,812,127	2,375,501	0

Ts/Tv (transitions / transversions)

Note: Only SNPs are used for this statistic.
Note: This Ts/Tv ratio is a 'raw' ratio (ratio of observed events).

Transitions	383,186,947
Transversions	350,309,766
Ts/Tv ratio	1.0939

All variants:

Sample 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,UA_Che_Uma_1_2014-10-01,UA_Che_Uma_1_2015-09-26,UA_Che_Uma_1_2016-09-11,UA_Che_Uma_1_2016-09-17,UA_Che_Uma_1_2017-09-16,UA_Che_Uma_1_2017-10-07,UA_Che_Uma_1_2018-09-21,UA_Che_Uma_1_2019-08-13,UA_Che_Uma_1_2019-10-14,UA_Che_Uma_1_2019-10-20,UA_Che_Uma_1_2020-08-19,UA_Che_Uma_1_2020-09-27,UA_Che_Uma_1_2021-09-19,UA_Che_Var_1_2014-08-18,UA_Che_Var_1_2015-08-25,UA_Che_Var_1_2016-08-26,UA_Che_Var_1_2018-09-03,UA_Che_Var_1_2019-09-14,UA_Che_Var_1_2020-10-11,UA_Che_Var_1_2021-09-26,UA_Don_Mar_1_2021-08-23,UA_Don_Mar_2_2021-08-23,UA_Don_Roz_1_2021-08-12,UA_Kha_Kha_1_2014-07-26,UA_Kha_Kha_1_2014-09-14,UA_Kha_Kha_1_2015-08-20,UA_Kha_Kha_1_2016-08-18,UA_Kha_Kha_1_2018-09-24,UA_Kha_Kha_1_2021-08-18,UA_Kie_Cho_1_2014-09-13,UA_Kie_Cho_1_2015-06-15,UA_Kie_Cho_1_2015-07-07,UA_Kie_Cho_1_2015-08-20,UA_Kie_Cho_1_2015-08-26,UA_Kie_Cho_1_2016-09-04,UA_Kie_Cho_1_2016-09-05,UA_Kie_Cho_1_2019-09-06,UA_Kie_Cho_2_2014-09-13,UA_Kie_Cho_2_2015-08-26,UA_Kie_Cho_2_2016-09-04,UA_Kie_Cho_3_2014-09-13,UA_Kie_Cho_3_2015-08-26,UA_Kie_Cho_4_2014-09-13,UA_Kie_Cho_4_2015-08-26,UA_Kie_Cho_5_2015-08-26,UA_Kie_Cho_6_2015-08-26,UA_Kie_Hle_1_2021-08-29,UA_Kie_Kho_1_2021-08-09,UA_Kie_Kop_1_2019-09-06,UA_Kie_Kyi_1_2014-08-09,UA_Kie_Kyi_1_2014-09-08,UA_Kie_Kyi_1_2014-10-11,UA_Kie_Kyi_1_2015-08-10,UA_Kie_Kyi_1_2016-08-06,UA_Kie_Kyi_1_2016-09-04,UA_Kie_Kyi_1_2016-10-03,UA_Kie_Kyi_1_2020-09-29,UA_Kie_Pri_1_2016-09-03,UA_Kie_Vys_1_2017-08-11,UA_Kie_Vys_1_2017-09-03,UA_Kie_Vys_1_2017-09-26,UA_Kie_Vys_1_2017-10-19,UA_Kie_Vys_1_2018-07-25,UA_Kie_Vys_1_2018-08-29,UA_Kie_Vys_1_2018-09-27,UA_Kie_Vys_1_2019-08-12,UA_Kie_Vys_1_2019-09-02,UA_Kie_Vys_1_2020-08-18,UA_Kie_Vys_1_2020-09-21,UA_Kie_Vys_1_2020-10-15,UA_Kie_Vys_1_2021-08-01,UA_Kie_Vys_1_2021-09-19,UA_Lvi_Dro_1_2014-08-24,UA_Lvi_Dro_1_2015-09-18,UA_Lvi_Dro_1_2016-09-12,UA_Myk_Ryb_1_2021-07-22,UA_Ode_Ode_1_2013-05-16,UA_Ode_Ode_1_2013-10-15,UA_Ode_Ode_1_2014-07-03,UA_Ode_Ode_1_2014-07-22,UA_Ode_Ode_1_2014-08-29,UA_Ode_Ode_1_2014-10-10,UA_Ode_Ode_1_2015-06-30,UA_Ode_Ode_1_2015-07-26,UA_Ode_Ode_1_2015-08-27,UA_Ode_Ode_1_2015-09-26,UA_Ode_Ode_1_2016-08-20,UA_Ode_Ode_1_2016-09-15,UA_Ode_Ode_1_2017-08-12,UA_Ode_Ode_1_2017-09-23,UA_Ode_Ode_1_2018-06-30,UA_Ode_Ode_1_2018-08-15,UA_Ode_Ode_1_2018-09-15,UA_Ode_Ode_1_2019-06-15,UA_Ode_Ode_1_2019-09-06,UA_Ode_Ode_1_2020-08-28,UA_Ode_Ode_1_2020-09-26,UA_Ode_Ode_1_2020-09-28,UA_Ode_Ode_1_2020-10-30,UA_Ode_Ode_1_2021-11-11,UA_Pol_Pyr_1_2014-08-20,UA_Pol_Pyr_1_2015-08-26,UA_Pol_Pyr_1_2016-08-23,UA_Pol_Pyr_1_2017-08-22,UA_Pol_Pyr_1_2017-09-03,UA_Pol_Pyr_1_2019-08-25,UA_Pol_Pyr_1_2019-09-06,UA_Pol_Pyr_1_2021-07-29,UA_Vol_Lut_1_2019-08-28,UA_Zap_Zap_1_2019-06-17,US_Cal_And_-1_2013-10-15,US_Cal_And_0_2013-10-15,US_Cal_And_10_2013-10-15,US_Cal_And_11_2013-10-15,US_Cal_And_12_2013-10-15,US_Cal_And_13_2013-10-15,US_Cal_And_14_2013-10-15,US_Cal_And_15_2013-10-15,US_Cal_And_16_2013-10-15,US_Cal_And_17_2013-10-15,US_Cal_And_18_2013-10-15,US_Cal_And_19_2013-10-15,US_Cal_And_1_2013-10-15,US_Cal_And_20_2013-10-15,US_Cal_And_2_2013-10-15,US_Cal_And_3_2013-10-15,US_Cal_And_4_2013-10-15,US_Cal_And_5_2013-10-15,US_Cal_And_6_2013-10-15,US_Cal_And_7_2013-10-15,US_Cal_And_8_2013-10-15,US_Cal_And_9_2013-10-15,US_Cal_Esp_1_2012-06-13,US_Cal_Esp_1_2012-08-22,US_Cal_Esp_1_2012-11-20,US_Cal_Esp_1_2013-05-07,US_Cal_Esp_1_2013-09-01,US_Cal_Pla_1_2012-08-25,US_Cal_Pla_1_2012-11-18,US_Cal_Pla_1_2013-08-30,US_Cal_Pla_1_2013-12-16,US_Cal_Sto_1_2012-10-01,US_Cal_Sto_1_2012-11-15,US_Cal_Sto_1_2013-09-03,US_Cal_Tuo_1_2012-10-10,US_Cal_Tuo_1_2012-11-17,US_Cal_Tuo_1_2013-05-14,US_Cal_Tuo_1_2013-08-31,US_Cal_Tuo_1_2013-12-08,US_Flo_Hom_1_2004-07-01,US_Flo_Hom_1_2010-07-15,US_Flo_Hom_1_2010-12-16,US_Flo_Hom_2_2004-07-01,US_Geo_Ath_1_2014-06-17,US_Geo_Ath_1_2014-10-15,US_Geo_Hah_1_2008-07-16,US_Ill_Urb_1_2015-07-11,US_Kan_Top_1_2014-06-22,US_Kan_Top_1_2014-10-22,US_Lou_Bat_0_2013-09-15,US_Lou_Bat_10_2013-09-15,US_Lou_Bat_1_2013-09-15,US_Lou_Bat_2_2013-09-15,US_Lou_Bat_3_2013-09-15,US_Lou_Bat_4_2013-09-15,US_Lou_Bat_5_2013-09-15,US_Lou_Bat_6_2013-09-15,US_Lou_Bat_7_2013-09-15,US_Lou_Bat_8_2013-09-15,US_Lou_Bat_9_2013-09-15,US_Lou_Wes_0_2013-09-15,US_Lou_Wes_10_2013-09-15,US_Lou_Wes_1_2013-09-15,US_Lou_Wes_2_2013-09-15,US_Lou_Wes_3_2013-09-15,US_Lou_Wes_4_2013-09-15,US_Lou_Wes_5_2013-09-15,US_Lou_Wes_6_2013-09-15,US_Lou_Wes_7_2013-09-15,US_Lou_Wes_8_2013-09-15,US_Lou_Wes_9_2013-09-15,US_Mai_Bow_1_2004-07-01,US_Mai_Bow_1_2009-10-15,US_Mai_Bow_2_2009-10-15,US_Mai_Wal_1_2004-07-01,US_Mas_Lan_1_2012-07-28,US_Mas_Lan_1_2012-10-02,US_Mas_Lan_1_2014-07-20,US_Mas_Lan_1_2014-10-20,US_Mic_Ben_1_2014-07-26,US_Mic_Ben_1_2014-11-05,US_New_Ith_1_2012-07-25,US_New_Ith_1_2012-09-23,US_Nor_Ral_2_2003-07-01,US_Pen_Lin_1_2009-07-15,US_Pen_Lin_1_2009-11-16,US_Pen_Lin_1_2010-07-15,US_Pen_Lin_1_2010-11-16,US_Pen_Lin_1_2011-07-15,US_Pen_Lin_1_2011-10-15,US_Pen_Lin_1_2011-11-16,US_Pen_Lin_1_2012-07-16,US_Pen_Lin_1_2012-09-13,US_Pen_Lin_1_2012-10-10,US_Pen_Lin_1_2013-06-15,US_Pen_Lin_1_2014-06-27,US_Pen_Lin_1_2014-10-17,US_Pen_Lin_1_2015-07-15,US_Pen_Lin_1_2015-10-15,US_Pen_Sta_1_2014-06-18,US_Pen_Sta_1_2014-10-16,US_Pen_Sta_1_2015-07-18,US_Rho_Pro_10_2015-06-11,US_Rho_Pro_11_2015-06-11,US_Rho_Pro_12_2015-06-11,US_Rho_Pro_1_2014-09-25,US_Rho_Pro_1_2015-06-11,US_Rho_Pro_2_2014-09-25,US_Rho_Pro_2_2015-06-11,US_Rho_Pro_3_2014-09-25,US_Rho_Pro_3_2015-06-11,US_Rho_Pro_4_2014-09-25,US_Rho_Pro_4_2015-06-11,US_Rho_Pro_5_2014-09-25,US_Rho_Pro_5_2015-06-11,US_Rho_Pro_6_2015-06-11,US_Rho_Pro_7_2015-06-11,US_Rho_Pro_8_2015-06-11,US_Rho_Pro_9_2015-06-11,US_Sou_Eut_1_2010-07-15,US_Tex_Lub_0_2013-09-15,US_Tex_Lub_10_2013-09-15,US_Tex_Lub_1_2013-09-15,US_Tex_Lub_2_2013-09-15,US_Tex_Lub_3_2013-09-15,US_Tex_Lub_4_2013-09-15,US_Tex_Lub_5_2013-09-15,US_Tex_Lub_6_2013-09-15,US_Tex_Lub_7_2013-09-15,US_Tex_Lub_8_2013-09-15,US_Tex_Lub_9_2013-09-15,US_Tex_Sto_0_2013-09-15,US_Tex_Sto_10_2013-09-15,US_Tex_Sto_1_2013-09-15,US_Tex_Sto_2_2013-09-15,US_Tex_Sto_3_2013-09-15,US_Tex_Sto_4_2013-09-15,US_Tex_Sto_5_2013-09-15,US_Tex_Sto_6_2013-09-15,US_Tex_Sto_7_2013-09-15,US_Tex_Sto_8_2013-09-15,US_Tex_Sto_9_2013-09-15,US_Vir_Cha_1_2012-07-18,US_Vir_Cha_1_2012-11-05,US_Vir_Cha_1_2014-06-25,US_Vir_Cha_1_2014-10-14,US_Vir_Cha_1_2015-07-01,US_Vir_Cha_1_2015-10-19,US_Vir_Cha_1_2016-06-24,US_Vir_Cha_1_2016-07-08,US_Vir_Cha_1_2016-07-22,US_Vir_Cha_1_2016-08-19,US_Vir_Cha_1_2016-09-02,US_Vir_Cha_1_2016-09-16,US_Vir_Cha_1_2016-10-03,US_Vir_Cha_1_2016-10-14,US_Vir_Cha_1_2016-10-28,US_Vir_Cha_1_2016-11-11,US_Vir_Cha_1_2016-12-03,US_Vir_Cha_1_2017-06-22,US_Vir_Cha_1_2017-07-07,US_Vir_Cha_1_2017-07-20,US_Vir_Cha_1_2017-08-03,US_Vir_Cha_1_2017-08-17,US_Vir_Cha_1_2017-08-31,US_Vir_Cha_1_2017-09-14,US_Vir_Cha_1_2017-09-28,US_Vir_Cha_1_2017-10-12,US_Vir_Cha_1_2017-10-26,US_Vir_Cha_1_2017-11-09,US_Vir_Cha_1_2017-11-24,US_Vir_Cha_1_2017-12-07,US_Vir_Cha_1_2018-06-28,US_Vir_Cha_1_2018-07-05,US_Vir_Cha_1_2018-07-12,US_Vir_Cha_1_2018-07-26,US_Vir_Cha_1_2018-08-09,US_Vir_Cha_1_2018-08-23,US_Vir_Cha_1_2018-09-06,US_Vir_Cha_1_2018-09-20,US_Vir_Cha_1_2018-10-04,US_Vir_Cha_1_2018-10-18,US_Vir_Cha_1_2018-10-25,US_Vir_Cha_1_2018-11-01,US_Vir_Cha_1_2018-11-29,US_Vir_Cha_1_2019-06-18,US_Vir_Cha_1_2019-08-14,US_Vir_Cha_1_2019-09-06,US_Vir_Cha_1_2020-07-03,US_Vir_Cha_1_2020-08-21,US_Vir_Cha_1_2020-09-30,US_Vir_Cha_1_2021-10-15,US_Was_Tac_1_2014-07-15,US_Wis_Cro_1_2012-06-10,US_Wis_Cro_1_2012-09-11,US_Wis_Cro_1_2012-10-20,US_Wis_Cro_1_2013-07-02,US_Wis_Cro_1_2013-09-22,US_Wis_Cro_1_2014-06-25,US_Wis_Cro_1_2014-09-18,Total
Transitions ,630860,693195,603597,610705,676823,660420,550837,607026,88470,89754,368289,202703,308292,335859,339732,353360,325458,344201,301889,446564,228267,495081,364023,337839,322886,349425,310962,356010,327946,334866,377720,87454,312661,313967,341745,254094,248208,375934,440751,222143,383637,318390,319102,283765,88955,355530,461352,291291,358796,305960,393539,377997,303696,350597,237531,79096,284964,304114,304106,349480,241611,273801,298342,355406,354988,320345,73321,319598,284319,298690,410847,232755,318542,203033,383175,327889,324398,80916,326772,264092,416998,263835,283065,359800,386628,342677,408126,281041,295025,254040,85107,367992,264861,266593,350610,360582,321100,219636,323832,328652,377090,572102,593321,496366,597183,548895,623081,75308,183306,156533,363793,287689,276667,249059,246845,388413,302973,336011,76427,174200,359816,358699,370070,219969,413112,302747,407693,329179,319977,687853,707620,590408,640724,590166,626472,649437,596426,581253,597734,630567,594407,687887,678350,693936,684989,657939,668703,656420,632845,692085,706668,653407,658332,556739,578012,568068,473680,453049,580515,630598,575117,557633,625196,620337,674500,676353,659124,689760,624195,634033,523259,626458,600847,622157,548605,609440,590365,568593,631598,604999,587132,614153,399643,606522,604991,578537,558862,595567,613876,583798,586132,557579,579393,574892,584423,602189,593152,610877,581301,701380,616375,704816,608820,685499,653999,597154,563522,568576,645925,597174,641012,560080,664172,658763,623956,620044,687547,629805,569805,671522,575263,590995,607956,629584,586807,623263,341546,562279,594038,478456,577976,549437,628494,691108,578796,596251,643152,668058,653002,685486,602421,564492,578487,580802,549894,578135,584715,511093,599228,503721,585156,560821,68521,524377,567517,614417,616396,600421,644535,610966,588463,578436,628631,625297,631575,681030,668776,682031,610811,623900,500708,698796,674659,536300,540222,474587,551906,531643,578119,580259,593719,605599,576419,639737,584793,602480,651564,645442,643321,691506,604582,559519,600011,614373,507628,609146,639384,479255,48760,577328,528218,578254,616509,563259,576042,597194,326147,622210,601064,597415,532900,590664,563737,540372,545037,556612,564296,585749,587550,651665,60062,580493,598708,555157,592303,559520,730162,316480,621421,643601,650173,571848,592270,538682,729636,551505,597969,593819,572064,593336,552881,570885,561068,546896,595122,577199,573603,588048,591628,626063,616565,617321,514587,625713,598574,647365,606719,591293,650788,636913,542905,593724,549250,573641,598524,489684,650234,551250,512709,632215,631293,639607,664342,581727,594542,646986,579088,688491,681258,456745,693624,646377,635496,677714,661147,685960,625415,570592,583129,591353,558582,509998,663826,620420,597746,603775,610553,607853,577142,576048,599390,628389,592026,623235,607718,629071,597407,597162,598096,553649,621370,614508,569417,613171,557934,642693,578424,641926,602092,589694,510838,505963,531218,565443,550105,547228,543366,476069,569750,617995,641583,625720,539744,505007,595290,564433,592669,535593,573426,614789,608791,664981,630991,597465,594692,610515,625065,642511,609903,628990,646226,656163,570046,618179,649473,653912,620463,652281,613577,616599,646974,623857,595736,587359,574058,592530,583713,566830,657276,657148,642416,621400,569675,548092,591902,552450,584307,608944,592090,592414,613323,510144,554431,582503,442763,594414,556459,593349,608475,626615,602035,576681,649040,658577,596643,578237,606341,610505,628949,621338,623870,599559,594332,600654,464285,539459,552113,566422,578288,449442,585301,564368,503274,539673,576166,534438,633576,636037,669878,579003,556999,565580,582488,589853,569073,582533,563741,78280,185275,44731,210069,134323,157966,206603,166558,179678,166451,55492,24227,80929,111679,339134,129183,306894,227452,345943,199596,419912,666229,634461,632929,653423,684731,710278,638161,686660,662374,608452,624340,680915,617341,697441,637405,704184,647516,459948,702672,1508454,449861,715144,776172,753022,712495,692199,669110,69915,293043,202940,93043,388179,205270,316168,328401,271987,307990,393773,82680,96668,60292,253936,315895,323113,368131,95295,255815,384196,348075,510303,707709,828250,503495,661414,644633,718679,747892,741281,759876,685885,607376,526464,769811,686476,423359,701568,674165,1701934,675166,692019,667313,559933,728345,678565,770475,818617,744410,688800,717811,712922,473443,493500,481896,516394,522088,534131,501632,573955,496009,582613,495083,580904,490651,493219,485731,529529,476272,714619,68718,445439,374862,330161,334181,299333,414056,330726,431609,393115,369467,86782,421142,386345,322496,327577,249627,314198,295013,279959,359076,339338,686792,624958,690682,702756,714531,709821,444138,655425,522013,621088,697574,681266,475659,678978,774794,762398,707115,756930,695560,716338,543319,794879,747990,685433,702461,675419,649852,684704,589621,670621,493787,558724,733653,714450,698865,727510,710286,695253,712214,730470,714914,724492,587398,628486,621005,526982,516242,236604,139026,517170,793201,504509,644279,644499,898023,690907,779876,775876,383186947
Transversions ,934594,632999,1312884,1238328,602845,588559,474102,528585,80461,81380,318555,182456,269882,293997,296034,309596,284719,302167,265363,384410,202393,416461,315184,294177,281499,304089,272332,311521,288047,293045,327392,82994,271259,272226,298181,227348,221252,324528,388238,197841,334004,277938,287871,256551,84641,310422,405092,257076,312212,269116,341194,328928,269355,306375,214074,73669,247058,262488,262354,299291,212992,238914,258709,304049,306219,278096,75633,275457,247948,259220,361901,204787,278176,177859,325214,282799,284057,80486,280133,232052,356071,232816,249524,308846,332080,293954,360465,247262,262645,226433,82338,322736,231442,231589,298698,306748,273338,194510,279364,283004,330426,497926,520089,429280,518737,472289,551153,69151,161448,133843,309228,249482,233811,218479,211185,326004,249900,288157,75119,156435,308896,305695,312522,192408,406065,261171,340887,273009,273571,599087,628106,518262,594567,1004649,551997,605086,524881,505508,521511,556995,521075,604035,595546,604513,599483,574445,593212,582841,558305,617854,631664,576040,580754,483909,509581,495596,402964,382308,508022,559688,505662,485485,548036,633176,598996,602269,581704,613811,557835,560352,451040,555484,527253,546726,475004,536932,517225,491470,556179,530568,505027,539717,333360,532478,587769,567843,484479,523134,538380,514954,515704,488748,509217,501213,511940,528067,515415,531499,503524,619981,540377,627955,533972,610157,576429,519633,485377,490826,571367,517516,565027,478011,588276,582296,597580,607344,609656,551655,494758,592963,495707,513880,529178,551719,510563,548354,285211,484443,513698,402598,501807,476417,613092,618047,595071,570262,568231,594480,578119,611207,528288,495149,504489,506095,481579,509710,514401,437690,531853,432683,512772,485091,56921,447852,495903,539908,540604,525486,2212947,541651,513634,507038,556480,1569008,1543785,606142,596354,604276,538464,548141,427979,615945,594454,462821,469078,404335,481017,457188,504095,511017,520137,941341,508089,564602,516159,533874,576802,570002,568665,614867,530615,484468,526706,542994,432867,2035807,562292,412862,42756,506168,452595,502282,544591,490515,503591,523680,275754,549652,523304,527736,462694,517322,487571,466183,469564,480828,489447,516175,514350,585677,52483,510990,524026,481181,522823,488309,637822,264030,546831,572599,575699,500804,577927,467211,654515,482704,524856,520598,496748,531366,484872,499234,490772,477419,530621,506648,501304,517695,521644,557012,542654,545306,446575,552776,528346,1468175,539108,521967,579448,566147,472343,522183,482727,503913,528325,422982,577622,483786,445821,565565,552580,568953,592601,1269360,1105307,574864,504628,617670,609373,376022,622890,573832,562388,607408,585189,610796,552403,495716,512460,517477,484728,441438,600826,548939,520862,531781,538528,530433,508546,506165,527250,555627,518515,545679,535083,557049,521236,521542,520126,480650,547578,540992,498946,538391,485942,570409,923848,570996,530037,516078,440505,433710,456417,492622,477853,476095,472042,408547,497974,545016,570364,552176,465942,434561,523905,498681,520896,463778,500636,964850,897456,596029,560509,524008,520114,976828,554911,569351,539201,554761,572303,584560,499447,541810,576083,580048,942737,582065,539641,542982,572488,555075,524723,518069,504314,520384,509928,871674,585164,582297,568017,547858,497018,464813,519511,479767,511281,538485,522242,522623,541964,438581,483755,510625,375533,521676,483683,518948,532574,558138,532616,506826,582816,581554,524674,505740,532831,537005,558446,547782,551546,583332,521959,526306,394457,474188,481860,497343,510014,377959,518782,497364,433774,472122,507043,465005,557843,565007,596128,504743,488185,497192,512854,514563,496115,511488,492522,69673,157083,37429,175011,111442,134822,173070,140752,151935,139767,48520,21282,68608,96475,280054,109757,248787,189248,294614,169597,355290,581530,551457,550446,570846,599234,620504,554392,600089,579228,524293,541664,597718,536781,610488,553060,617838,563192,395928,623582,1767388,387482,637199,697127,674569,630313,609969,586479,65973,266384,178537,80793,326585,177636,274632,282627,237273,257558,336648,78756,85289,52653,217278,271473,277462,340840,80927,219576,326887,297682,436153,662616,1078934,430788,579880,561989,639333,667781,656048,674277,601835,529211,454400,694723,603437,396237,627149,592387,1804825,590535,604667,583518,479489,663554,594611,683814,729436,660966,609310,634837,627278,399371,418435,408287,431902,444002,448755,424883,489539,418769,498313,419039,497478,414675,417876,410018,451783,401883,638036,70168,439928,321928,283341,290298,262369,356002,283052,365834,335660,316493,80202,373432,331246,276173,284297,211122,272844,256881,241487,310370,287211,606722,542340,612233,622354,631070,629018,376226,576514,452521,541887,623519,606750,399990,603946,696822,693475,631026,681703,619117,640763,465321,717258,670630,607750,626567,597543,570981,606484,510712,594679,418553,483014,654870,638769,622371,651892,631716,618983,626275,644383,627684,650456,506896,552983,541122,451118,443915,198661,118406,443909,717630,432265,558603,559735,812412,609600,695518,698102,350309766
Ts/Tv ,0.675,1.095,0.460,0.493,1.123,1.122,1.162,1.148,1.100,1.103,1.156,1.111,1.142,1.142,1.148,1.141,1.143,1.139,1.138,1.162,1.128,1.189,1.155,1.148,1.147,1.149,1.142,1.143,1.139,1.143,1.154,1.054,1.153,1.153,1.146,1.118,1.122,1.158,1.135,1.123,1.149,1.146,1.108,1.106,1.051,1.145,1.139,1.133,1.149,1.137,1.153,1.149,1.127,1.144,1.110,1.074,1.153,1.159,1.159,1.168,1.134,1.146,1.153,1.169,1.159,1.152,0.969,1.160,1.147,1.152,1.135,1.137,1.145,1.142,1.178,1.159,1.142,1.005,1.166,1.138,1.171,1.133,1.134,1.165,1.164,1.166,1.132,1.137,1.123,1.122,1.034,1.140,1.144,1.151,1.174,1.175,1.175,1.129,1.159,1.161,1.141,1.149,1.141,1.156,1.151,1.162,1.131,1.089,1.135,1.170,1.176,1.153,1.183,1.140,1.169,1.191,1.212,1.166,1.017,1.114,1.165,1.173,1.184,1.143,1.017,1.159,1.196,1.206,1.170,1.148,1.127,1.139,1.078,0.587,1.135,1.073,1.136,1.150,1.146,1.132,1.141,1.139,1.139,1.148,1.143,1.145,1.127,1.126,1.134,1.120,1.119,1.134,1.134,1.151,1.134,1.146,1.175,1.185,1.143,1.127,1.137,1.149,1.141,0.980,1.126,1.123,1.133,1.124,1.119,1.131,1.160,1.128,1.140,1.138,1.155,1.135,1.141,1.157,1.136,1.140,1.163,1.138,1.199,1.139,1.029,1.019,1.154,1.138,1.140,1.134,1.137,1.141,1.138,1.147,1.142,1.140,1.151,1.149,1.154,1.131,1.141,1.122,1.140,1.123,1.135,1.149,1.161,1.158,1.130,1.154,1.134,1.172,1.129,1.131,1.044,1.021,1.128,1.142,1.152,1.132,1.160,1.150,1.149,1.141,1.149,1.137,1.198,1.161,1.156,1.188,1.152,1.153,1.025,1.118,0.973,1.046,1.132,1.124,1.130,1.122,1.140,1.140,1.147,1.148,1.142,1.134,1.137,1.168,1.127,1.164,1.141,1.156,1.204,1.171,1.144,1.138,1.140,1.143,0.291,1.128,1.146,1.141,1.130,0.399,0.409,1.124,1.121,1.129,1.134,1.138,1.170,1.135,1.135,1.159,1.152,1.174,1.147,1.163,1.147,1.135,1.141,0.643,1.134,1.133,1.133,1.129,1.130,1.132,1.131,1.125,1.139,1.155,1.139,1.131,1.173,0.299,1.137,1.161,1.140,1.141,1.167,1.151,1.132,1.148,1.144,1.140,1.183,1.132,1.149,1.132,1.152,1.142,1.156,1.159,1.161,1.158,1.153,1.135,1.142,1.113,1.144,1.136,1.143,1.154,1.133,1.146,1.145,1.199,1.136,1.124,1.129,1.142,1.025,1.153,1.115,1.143,1.139,1.141,1.152,1.117,1.140,1.144,1.143,1.146,1.122,1.139,1.144,1.136,1.134,1.124,1.136,1.132,1.152,1.132,1.133,0.441,1.125,1.133,1.123,1.125,1.149,1.137,1.138,1.138,1.133,1.158,1.126,1.139,1.150,1.118,1.142,1.124,1.121,0.458,0.538,1.125,1.148,1.115,1.118,1.215,1.114,1.126,1.130,1.116,1.130,1.123,1.132,1.151,1.138,1.143,1.152,1.155,1.105,1.130,1.148,1.135,1.134,1.146,1.135,1.138,1.137,1.131,1.142,1.142,1.136,1.129,1.146,1.145,1.150,1.152,1.135,1.136,1.141,1.139,1.148,1.127,0.626,1.124,1.136,1.143,1.160,1.167,1.164,1.148,1.151,1.149,1.151,1.165,1.144,1.134,1.125,1.133,1.158,1.162,1.136,1.132,1.138,1.155,1.145,0.637,0.678,1.116,1.126,1.140,1.143,0.625,1.126,1.128,1.131,1.134,1.129,1.122,1.141,1.141,1.127,1.127,0.658,1.121,1.137,1.136,1.130,1.124,1.135,1.134,1.138,1.139,1.145,0.650,1.123,1.129,1.131,1.134,1.146,1.179,1.139,1.151,1.143,1.131,1.134,1.134,1.132,1.163,1.146,1.141,1.179,1.139,1.150,1.143,1.143,1.123,1.130,1.138,1.114,1.132,1.137,1.143,1.138,1.137,1.126,1.134,1.131,1.028,1.139,1.141,1.177,1.138,1.146,1.139,1.134,1.189,1.128,1.135,1.160,1.143,1.136,1.149,1.136,1.126,1.124,1.147,1.141,1.138,1.136,1.146,1.147,1.139,1.145,1.124,1.179,1.195,1.200,1.205,1.172,1.194,1.183,1.183,1.191,1.144,1.138,1.180,1.158,1.211,1.177,1.234,1.202,1.174,1.177,1.182,1.146,1.151,1.150,1.145,1.143,1.145,1.151,1.144,1.144,1.161,1.153,1.139,1.150,1.142,1.153,1.140,1.150,1.162,1.127,0.853,1.161,1.122,1.113,1.116,1.130,1.135,1.141,1.060,1.100,1.137,1.152,1.189,1.156,1.151,1.162,1.146,1.196,1.170,1.050,1.133,1.145,1.169,1.164,1.165,1.080,1.178,1.165,1.175,1.169,1.170,1.068,0.768,1.169,1.141,1.147,1.124,1.120,1.130,1.127,1.140,1.148,1.159,1.108,1.138,1.068,1.119,1.138,0.943,1.143,1.144,1.144,1.168,1.098,1.141,1.127,1.122,1.126,1.130,1.131,1.137,1.185,1.179,1.180,1.196,1.176,1.190,1.181,1.172,1.184,1.169,1.181,1.168,1.183,1.180,1.185,1.172,1.185,1.120,0.979,1.013,1.164,1.165,1.151,1.141,1.163,1.168,1.180,1.171,1.167,1.082,1.128,1.166,1.168,1.152,1.182,1.152,1.148,1.159,1.157,1.181,1.132,1.152,1.128,1.129,1.132,1.128,1.181,1.137,1.154,1.146,1.119,1.123,1.189,1.124,1.112,1.099,1.121,1.110,1.123,1.118,1.168,1.108,1.115,1.128,1.121,1.130,1.138,1.129,1.155,1.128,1.180,1.157,1.120,1.118,1.123,1.116,1.124,1.123,1.137,1.134,1.139,1.114,1.159,1.137,1.148,1.168,1.163,1.191,1.174,1.165,1.105,1.167,1.153,1.151,1.105,1.133,1.121,1.111,1.094

Only known variants (i.e. the ones having a non-empty ID field):

No results available (empty input?)

Allele frequency

Min	0
Max	99
Mean	2.249
Median	0
Standard deviation	9.197
Values	0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36,37,38,39,40,41,42,43,44,45,46,47,48,49,50,51,52,53,54,55,56,57,58,59,60,61,62,63,64,65,66,67,68,69,70,71,72,73,74,75,76,77,78,79,80,81,82,83,84,85,86,87,88,89,90,91,92,93,94,95,96,97,98,99
Count	28673227,815684,374123,232082,165890,129322,105536,89975,77826,68079,61811,54678,49961,45624,41809,38784,36282,34310,32093,29785,28928,27625,26830,25846,24804,25120,24270,23859,23708,23072,23354,23210,23198,23648,24479,24953,25775,26768,28177,29472,32746,35161,38947,43902,49733,57849,68597,83574,106109,123893,104149,51176,29874,18635,12859,9350,7079,5477,4456,3745,3345,2847,2598,2284,2049,1813,1777,1673,1537,1422,1390,1301,1387,1271,1174,1164,1140,1133,1193,1079,1183,1201,1076,1112,1070,1122,1149,1094,1107,1040,1046,952,928,913,956,1003,1049,1090,1433,2603

Allele Count

Min	1
Max	1,390
Mean	28.741
Median	1
Standard deviation	111.562
Values	1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36,37,38,39,40,41,42,43,44,45,46,47,48,49,50,51,52,53,54,55,56,57,58,59,60,61,62,63,64,65,66,67,68,69,70,71,72,73,74,75,76,77,78,79,80,81,82,83,84,85,86,87,88,89,90,91,92,93,94,95,96,97,98,99,100,101,102,103,104,105,106,107,108,109,110,111,112,113,114,115,116,117,118,119,120,121,122,123,124,125,126,127,128,129,130,131,132,133,134,135,136,137,138,139,140,141,142,143,144,145,146,147,148,149,150,151,152,153,154,155,156,157,158,159,160,161,162,163,164,165,166,167,168,169,170,171,172,173,174,175,176,177,178,179,180,181,182,183,184,185,186,187,188,189,190,191,192,193,194,195,196,197,198,199,200,201,202,203,204,205,206,207,208,209,210,211,212,213,214,215,216,217,218,219,220,221,222,223,224,225,226,227,228,229,230,231,232,233,234,235,236,237,238,239,240,241,242,243,244,245,246,247,248,249,250,251,252,253,254,255,256,257,258,259,260,261,262,263,264,265,266,267,268,269,270,271,272,273,274,275,276,277,278,279,280,281,282,283,284,285,286,287,288,289,290,291,292,293,294,295,296,297,298,299,300,301,302,303,304,305,306,307,308,309,310,311,312,313,314,315,316,317,318,319,320,321,322,323,324,325,326,327,328,329,330,331,332,333,334,335,336,337,338,339,340,341,342,343,344,345,346,347,348,349,350,351,352,353,354,355,356,357,358,359,360,361,362,363,364,365,366,367,368,369,370,371,372,373,374,375,376,377,378,379,380,381,382,383,384,385,386,387,388,389,390,391,392,393,394,395,396,397,398,399,400,401,402,403,404,405,406,407,408,409,410,411,412,413,414,415,416,417,418,419,420,421,422,423,424,425,426,427,428,429,430,431,432,433,434,435,436,437,438,439,440,441,442,443,444,445,446,447,448,449,450,451,452,453,454,455,456,457,458,459,460,461,462,463,464,465,466,467,468,469,470,471,472,473,474,475,476,477,478,479,480,481,482,483,484,485,486,487,488,489,490,491,492,493,494,495,496,497,498,499,500,501,502,503,504,505,506,507,508,509,510,511,512,513,514,515,516,517,518,519,520,521,522,523,524,525,526,527,528,529,530,531,532,533,534,535,536,537,538,539,540,541,542,543,544,545,546,547,548,549,550,551,552,553,554,555,556,557,558,559,560,561,562,563,564,565,566,567,568,569,570,571,572,573,574,575,576,577,578,579,580,581,582,583,584,585,586,587,588,589,590,591,592,593,594,595,596,597,598,599,600,601,602,603,604,605,606,607,608,609,610,611,612,613,614,615,616,617,618,619,620,621,622,623,624,625,626,627,628,629,630,631,632,633,634,635,636,637,638,639,640,641,642,643,644,645,646,647,648,649,650,651,652,653,654,655,656,657,658,659,660,661,662,663,664,665,666,667,668,669,670,671,672,673,674,675,676,677,678,679,680,681,682,683,684,685,686,687,688,689,690,691,692,693,694,695,696,697,698,699,700,701,702,703,704,705,706,707,708,709,710,711,712,713,714,715,716,717,718,719,720,721,722,723,724,725,726,727,728,729,730,731,732,733,734,735,736,737,738,739,740,741,742,743,744,745,746,747,748,749,750,751,752,753,754,755,756,757,758,759,760,761,762,763,764,765,766,767,768,769,770,771,772,773,774,775,776,777,778,779,780,781,782,783,784,785,786,787,788,789,790,791,792,793,794,795,796,797,798,799,800,801,802,803,804,805,806,807,808,809,810,811,812,813,814,815,816,817,818,819,820,821,822,823,824,825,826,827,828,829,830,831,832,833,834,835,836,837,838,839,840,841,842,843,844,845,846,847,848,849,850,851,852,853,854,855,856,857,858,859,860,861,862,863,864,865,866,867,868,869,870,871,872,873,874,875,876,877,878,879,880,881,882,883,884,885,886,887,888,889,890,891,892,893,894,895,896,897,898,899,900,901,902,903,904,905,906,907,908,909,910,911,912,913,914,915,916,917,918,919,920,921,922,923,924,925,926,927,928,929,930,931,932,933,934,935,936,937,938,939,940,941,942,943,944,945,946,947,948,949,950,951,952,953,954,955,956,957,958,959,960,961,962,963,964,965,966,967,968,969,970,971,972,973,974,975,976,977,978,979,980,981,982,983,984,985,986,987,988,989,990,991,992,993,994,995,996,997,998,999,1000,1001,1002,1003,1004,1005,1006,1007,1008,1009,1010,1011,1012,1013,1014,1015,1016,1017,1018,1019,1020,1021,1022,1023,1024,1025,1026,1027,1028,1029,1030,1031,1032,1033,1034,1035,1036,1037,1038,1039,1040,1041,1042,1043,1044,1045,1046,1047,1048,1049,1050,1051,1052,1053,1054,1055,1056,1057,1058,1059,1060,1061,1062,1063,1064,1065,1066,1067,1068,1069,1070,1071,1072,1073,1074,1075,1076,1077,1078,1079,1080,1081,1082,1083,1084,1085,1086,1087,1088,1089,1090,1091,1092,1093,1094,1095,1096,1097,1098,1099,1100,1101,1102,1103,1104,1105,1106,1107,1108,1109,1110,1111,1112,1113,1114,1115,1116,1117,1118,1119,1120,1121,1122,1123,1124,1125,1126,1127,1128,1129,1130,1131,1132,1133,1134,1135,1136,1137,1138,1139,1140,1141,1142,1143,1144,1145,1146,1147,1148,1149,1150,1151,1152,1153,1154,1155,1156,1157,1158,1159,1160,1161,1162,1163,1164,1165,1166,1167,1168,1169,1170,1171,1172,1173,1174,1175,1176,1177,1178,1179,1180,1181,1182,1183,1184,1185,1186,1187,1188,1189,1190,1191,1192,1193,1194,1195,1196,1197,1198,1199,1200,1201,1202,1203,1204,1205,1206,1207,1208,1209,1210,1211,1212,1213,1214,1215,1216,1217,1218,1219,1220,1221,1222,1223,1224,1225,1226,1227,1228,1229,1230,1231,1232,1233,1234,1235,1236,1237,1238,1239,1240,1241,1242,1243,1244,1245,1246,1247,1248,1249,1250,1251,1252,1253,1254,1255,1256,1257,1258,1259,1260,1261,1262,1263,1264,1265,1266,1267,1268,1269,1270,1271,1272,1273,1274,1275,1276,1277,1278,1279,1280,1281,1282,1283,1284,1285,1286,1287,1288,1289,1290,1291,1292,1293,1294,1295,1296,1297,1298,1299,1300,1301,1302,1303,1304,1305,1306,1307,1308,1309,1310,1311,1312,1313,1314,1315,1316,1317,1318,1319,1320,1321,1322,1323,1324,1325,1326,1327,1328,1329,1330,1331,1332,1333,1334,1335,1336,1337,1338,1339,1340,1341,1342,1343,1344,1345,1346,1347,1348,1349,1350,1351,1352,1353,1354,1355,1356,1357,1358,1359,1360,1361,1362,1363,1364,1365,1366,1367,1368,1370,1371,1373,1376,1377,1379,1382,1384,1390
Count	18344490,5276698,1974916,979213,588153,402115,298372,234208,190231,158837,136000,118932,104624,93655,84481,76678,70453,64922,59718,56096,52041,49012,45615,42708,40825,38706,36610,34716,33084,31560,30417,28941,27757,26642,25403,24289,23689,22791,21999,21359,20565,20211,19381,18683,18390,17820,17222,16706,16382,15734,15332,14918,14836,14489,14105,13662,13612,13335,12914,12677,12401,12118,11766,11749,11471,11115,11066,10882,10713,10582,10359,10255,10127,9791,9478,9548,9403,9128,9043,8897,9019,8867,8550,8509,8380,8184,8162,8123,8124,7893,7793,7810,7690,7410,7512,7298,7330,7190,6974,7092,7064,7016,6825,6640,6619,6450,6422,6475,6390,6199,6230,6115,6036,6122,6083,5909,5961,5816,5828,5801,5669,5607,5477,5540,5312,5302,5138,5210,5175,5110,5125,5081,5108,4993,5055,4998,4999,4803,4837,4693,4708,4690,4618,4727,4609,4467,4508,4514,4458,4338,4441,4274,4367,4349,4095,4119,4134,4168,4176,4060,4095,4017,3995,4066,3962,3895,3935,3883,3907,3764,3775,3753,3604,3615,3857,3718,3592,3691,3608,3586,3670,3538,3600,3452,3561,3362,3378,3387,3383,3376,3294,3371,3296,3385,3212,3271,3326,3176,3263,3116,3160,3044,3074,3128,3038,3041,3039,3043,2988,2980,2998,3051,2987,2931,2917,2911,2858,2883,2915,2866,2762,2918,2801,2850,2829,2754,2775,2855,2868,2842,2804,2723,2668,2783,2616,2581,2641,2719,2618,2628,2760,2623,2635,2709,2601,2698,2592,2597,2569,2595,2416,2475,2510,2514,2578,2554,2518,2521,2645,2542,2432,2457,2493,2492,2427,2426,2430,2459,2360,2497,2473,2409,2546,2430,2441,2501,2365,2385,2377,2322,2354,2383,2307,2395,2372,2245,2353,2329,2335,2303,2253,2239,2184,2287,2225,2266,2197,2275,2210,2228,2181,2106,2193,2145,2164,2183,2186,2128,2054,2111,2186,2095,2163,2119,2081,2124,2053,2042,2058,2090,2086,2162,2001,2061,2126,1947,2016,2032,2088,2031,2000,1943,1983,1951,2016,2009,2031,1993,1951,2037,1973,1881,1959,1942,1966,2025,1970,1945,2074,1913,1950,1947,2001,1946,1975,2020,1989,2002,1892,1945,1913,1931,1950,1988,1924,1918,1966,1973,1947,1879,1919,2017,1959,1951,1912,1982,2037,1945,1906,1968,1997,1923,1966,1996,2025,1942,2023,2019,2007,2044,1918,2012,2054,2017,1974,1955,1936,1982,1961,1966,1995,2092,2016,2052,1991,1929,2075,2110,2060,1925,2082,2052,1995,2084,2021,2006,2075,2014,2054,2158,2084,2031,2046,2062,2053,2004,2110,2118,2098,2100,2147,2211,2138,2157,2112,2088,2178,2121,2148,2211,2108,2098,2215,2247,2191,2266,2164,2221,2181,2311,2233,2179,2190,2336,2311,2304,2341,2196,2315,2299,2292,2286,2381,2421,2466,2342,2393,2359,2364,2417,2366,2423,2455,2475,2506,2521,2480,2514,2482,2459,2416,2464,2575,2512,2603,2580,2660,2533,2672,2544,2599,2616,2601,2620,2659,2741,2648,2836,2666,2701,2745,2777,2711,2732,2823,2871,2745,2861,2852,2934,2840,2976,2846,2988,2936,2962,2925,2975,2997,3087,3035,2985,3011,3088,3024,3245,3236,3150,3172,3205,3216,3189,3215,3251,3313,3350,3307,3422,3321,3275,3453,3393,3431,3379,3531,3359,3396,3524,3422,3541,3576,3575,3500,3617,3588,3541,3574,3602,3599,3548,3580,3754,3657,3718,3749,3811,3772,3674,3768,3864,3846,3837,3933,3916,3872,3971,3972,3847,3852,4014,3902,4033,4033,3963,4037,4082,4093,4097,4136,4049,4125,4050,4171,4102,4103,4097,4228,4110,4221,4177,4202,4165,4249,4247,4205,4220,4181,4263,4279,4350,4222,4241,4310,4343,4336,4232,4276,4260,4342,4256,4322,4405,4215,4292,4329,4349,4262,4288,4297,4348,4240,4405,4284,4337,4351,4189,4228,4303,4189,4174,4259,4135,4244,3984,3975,4033,3994,3909,4097,4018,3968,3880,3836,3920,3819,3604,3749,3651,3669,3641,3437,3443,3360,3323,3280,3137,3204,3128,3096,3016,3004,2873,2787,2715,2699,2617,2702,2622,2524,2299,2315,2283,2183,2137,2180,2003,2063,1922,1910,1890,1759,1786,1663,1633,1604,1543,1423,1402,1403,1408,1337,1288,1244,1216,1133,1101,1163,1042,1038,1026,1024,972,943,946,913,922,883,854,874,813,818,775,722,756,721,710,656,622,657,656,624,604,627,553,605,578,587,568,514,504,520,505,476,465,471,448,428,383,425,428,416,418,365,401,396,366,402,400,364,352,359,349,336,345,376,317,301,330,291,298,281,306,296,277,277,313,278,270,281,284,272,271,292,257,269,272,270,249,221,237,200,245,224,239,227,233,224,255,229,201,246,214,205,213,237,214,195,196,217,212,201,201,183,192,202,198,188,210,179,199,163,159,179,180,177,172,168,182,175,167,154,165,170,159,178,159,177,128,159,139,160,166,177,189,154,156,143,154,140,135,173,149,130,136,152,145,141,151,155,132,130,128,150,136,143,149,139,143,131,137,133,133,140,137,130,111,118,124,134,125,141,131,116,134,133,116,118,134,118,114,143,108,99,105,132,102,104,118,86,128,108,123,115,124,102,105,104,101,111,119,118,119,112,109,114,91,114,89,98,131,93,101,104,105,101,111,106,115,85,106,104,100,103,98,101,115,80,89,116,84,112,88,106,99,102,79,91,104,103,95,108,102,104,98,86,91,98,108,96,108,99,100,98,110,115,107,107,87,92,93,102,99,95,97,111,114,92,83,78,92,91,95,83,96,109,81,92,101,81,91,78,95,86,94,94,73,110,88,83,91,82,90,95,109,72,80,90,96,97,102,84,87,67,92,82,81,87,85,92,86,92,75,90,74,84,95,83,90,85,85,95,86,71,89,82,98,88,84,107,85,83,84,88,81,84,84,98,68,78,91,76,79,69,84,102,82,84,93,90,89,86,79,74,87,75,78,85,88,80,88,82,83,98,96,93,86,85,89,83,94,93,95,75,92,87,95,89,90,87,81,87,79,68,97,85,84,82,91,98,75,88,74,85,70,99,69,83,77,65,79,81,72,69,81,90,76,96,86,82,69,83,87,62,80,92,77,79,89,76,75,86,73,73,86,78,73,80,71,79,88,73,76,74,72,82,87,79,83,84,71,90,83,78,94,75,79,87,87,79,60,87,73,65,84,72,82,64,64,77,78,66,77,68,70,64,60,73,81,81,76,72,60,66,75,58,86,78,63,76,73,76,69,67,70,62,60,66,72,69,52,78,67,83,75,61,74,61,59,69,64,66,61,63,76,64,69,71,59,64,62,65,73,68,56,65,45,54,56,63,43,57,57,47,61,60,65,71,74,57,78,50,56,73,66,54,38,60,52,53,52,53,50,60,55,57,66,71,51,52,58,73,53,57,58,49,49,69,61,52,47,48,60,46,45,52,60,44,55,61,42,56,53,48,59,55,53,40,48,54,46,47,43,56,52,43,49,43,40,46,55,41,43,47,39,51,42,50,40,37,32,43,40,47,45,45,41,39,31,40,34,44,32,29,26,20,22,31,28,25,25,26,20,23,17,25,17,16,21,22,28,26,11,17,11,14,5,10,7,9,8,7,4,7,6,1,4,7,2,4,3,6,5,5,2,3,3,6,2,1,4,2,1,1,1,1,1,1

Hom/Het per sample

Sample_names , AT_Kar_See_1_2014-08-17, AT_Kar_See_1_2016-08-01, AT_Nie_Mau_1_2014-07-20, AT_Nie_Mau_1_2014-10-19, AT_Nie_Mau_1_2015-07-20, AT_Nie_Mau_1_2015-10-19, AT_Wie_Gro_1_2012-08-03, AT_Wie_Gro_1_2012-10-20, AU_Que_Inn_-1_2014-02-15, AU_Que_Inn_0_2014-02-15, AU_Que_Inn_10_2014-02-15, AU_Que_Inn_11_2014-02-15, AU_Que_Inn_12_2014-02-15, AU_Que_Inn_13_2014-02-15, AU_Que_Inn_14_2014-02-15, AU_Que_Inn_15_2014-02-15, AU_Que_Inn_16_2014-02-15, AU_Que_Inn_17_2014-02-15, AU_Que_Inn_18_2014-02-15, AU_Que_Inn_19_2014-02-15, AU_Que_Inn_1_2014-02-15, AU_Que_Inn_1_NA-MM-DD, AU_Que_Inn_20_2014-02-15, AU_Que_Inn_2_2014-02-15, AU_Que_Inn_3_2014-02-15, AU_Que_Inn_4_2014-02-15, AU_Que_Inn_5_2014-02-15, AU_Que_Inn_6_2014-02-15, AU_Que_Inn_7_2014-02-15, AU_Que_Inn_8_2014-02-15, AU_Que_Inn_9_2014-02-15, AU_Que_Isl_0_2014-03-15, AU_Que_Isl_10_2014-03-15, AU_Que_Isl_1_2014-03-15, AU_Que_Isl_2_2014-03-15, AU_Que_Isl_3_2014-03-15, AU_Que_Isl_4_2014-03-15, AU_Que_Isl_5_2014-03-15, AU_Que_Isl_6_2014-03-15, AU_Que_Isl_7_2014-03-15, AU_Que_Isl_8_2014-03-15, AU_Que_Isl_9_2014-03-15, AU_Que_Que_1_2004-07-01, AU_Que_Que_2_2004-07-01, AU_Que_Yep_0_2014-05-16, AU_Que_Yep_10_2014-05-16, AU_Que_Yep_1_2014-05-16, AU_Que_Yep_2_2014-05-16, AU_Que_Yep_3_2014-05-16, AU_Que_Yep_4_2014-05-16, AU_Que_Yep_5_2014-05-16, AU_Que_Yep_6_2014-05-16, AU_Que_Yep_7_2014-05-16, AU_Que_Yep_8_2014-05-16, AU_Que_Yep_9_2014-05-16, AU_Sou_MtG_0_2014-04-16, AU_Sou_MtG_10_2014-04-16, AU_Sou_MtG_1_2014-04-16, AU_Sou_MtG_2_2014-04-16, AU_Sou_MtG_3_2014-04-16, AU_Sou_MtG_4_2014-04-16, AU_Sou_MtG_5_2014-04-16, AU_Sou_MtG_6_2014-04-16, AU_Sou_MtG_7_2014-04-16, AU_Sou_MtG_8_2014-04-16, AU_Sou_MtG_9_2014-04-16, AU_Tas_Hil_0_2014-04-16, AU_Tas_Hil_10_2014-04-16, AU_Tas_Hil_1_2014-04-16, AU_Tas_Hil_2_2014-04-16, AU_Tas_Hil_3_2014-04-16, AU_Tas_Hil_4_2014-04-16, AU_Tas_Hil_5_2014-04-16, AU_Tas_Hil_6_2014-04-16, AU_Tas_Hil_7_2014-04-16, AU_Tas_Hil_8_2014-04-16, AU_Tas_Hil_9_2014-04-16, AU_Tas_Luc_0_2014-04-16, AU_Tas_Luc_10_2014-04-16, AU_Tas_Luc_1_2014-04-16, AU_Tas_Luc_2_2014-04-16, AU_Tas_Luc_3_2014-04-16, AU_Tas_Luc_4_2014-04-16, AU_Tas_Luc_5_2014-04-16, AU_Tas_Luc_6_2014-04-16, AU_Tas_Luc_7_2014-04-16, AU_Tas_Luc_8_2014-04-16, AU_Tas_Luc_9_2014-04-16, AU_Tas_Tas_1_2004-07-01, AU_Tas_Tas_2_2004-07-01, AU_Vic_Ham_0_2014-05-16, AU_Vic_Ham_10_2014-05-16, AU_Vic_Ham_1_2014-05-16, AU_Vic_Ham_2_2014-05-16, AU_Vic_Ham_3_2014-05-16, AU_Vic_Ham_4_2014-05-16, AU_Vic_Ham_5_2014-05-16, AU_Vic_Ham_6_2014-05-16, AU_Vic_Ham_7_2014-05-16, AU_Vic_Ham_8_2014-05-16, AU_Vic_Ham_9_2014-05-16, AU_Vic_Mel_1_2021-04-19, AU_Vic_Tah_1_2017-12-04, AU_Vic_Yer_1_NA-MM-DD, BR_Rio_San_1_2020-01-06, BR_Sao_USP_1_2019-09-15, BY_Bre_Bre_1_2015-09-11, CA_New_StJ_0_2013-10-15, CA_New_StJ_10_2013-10-15, CA_New_StJ_1_2013-10-15, CA_New_StJ_2_2013-10-15, CA_New_StJ_3_2013-10-15, CA_New_StJ_4_2013-10-15, CA_New_StJ_5_2013-10-15, CA_New_StJ_6_2013-10-15, CA_New_StJ_7_2013-10-15, CA_New_StJ_8_2013-10-15, CA_New_StJ_9_2013-10-15, CA_Nov_Gas_0_2013-10-15, CA_Nov_Gas_10_2013-10-15, CA_Nov_Gas_1_2013-10-15, CA_Nov_Gas_2_2013-10-15, CA_Nov_Gas_3_2013-10-15, CA_Nov_Gas_4_2013-10-15, CA_Nov_Gas_5_2013-10-15, CA_Nov_Gas_6_2013-10-15, CA_Nov_Gas_7_2013-10-15, CA_Nov_Gas_8_2013-10-15, CA_Nov_Gas_9_2013-10-15, CA_Ont_Sud_1_2015-08-03, CA_Ont_Sud_1_2015-09-30, CH_Fri_Ors_1_2020-08-23, CH_Vau_Cha_1_2014-07-24, CH_Vau_Cha_1_2014-10-05, CH_Vau_Cha_1_2015-08-01, CH_Vau_Cha_1_2016-08-15, CH_Vau_Vul_1_2018-09-18, CH_Vau_Vul_1_2019-07-17, CH_Vau_Vul_1_2019-09-24, CH_Vau_Vul_1_2020-07-29, CH_Vau_Vul_1_2020-09-15, CO_Cun_LaV_1_2019-02-21, CO_Cun_Tab_1_2019-12-20, CO_Mag_Sie_1_2019-07-24, CO_Tol_Gir_1_2019-04-04, CO_Tol_Mel_1_2019-06-11, CY_Nic_Nic_1_2014-08-10, DE_Bad_Bro_1_2014-06-26, DE_Bad_Bro_1_2014-10-15, DE_Bad_Bro_1_2015-06-30, DE_Bad_Bro_1_2015-10-25, DE_Bad_Bro_1_2016-07-24, DE_Bad_Bro_1_2016-10-23, DE_Bad_Bro_1_2017-06-27, DE_Bad_Bro_1_2018-06-26, DE_Bad_Bro_1_2019-07-03, DE_Bad_Bro_1_2020-07-16, DE_Bad_Bro_1_2020-10-24, DE_Bad_Bro_1_2021-07-21, DE_Bad_Bro_1_2021-10-20, DE_Bad_Wal_1_2019-10-02, DE_Bad_Wal_1_2020-10-02, DE_Bay_Mun_1_2014-06-19, DE_Bay_Mun_1_2014-09-03, DE_Bay_Mun_1_2015-06-01, DE_Bay_Mun_1_2015-09-01, DE_Bay_Mun_1_2016-06-25, DE_Bay_Mun_1_2016-09-01, DE_Bay_Mun_1_2017-06-20, DE_Bay_Mun_1_2017-09-03, DE_Bay_Mun_1_2018-06-25, DE_Bay_Mun_1_2018-09-09, DE_Bay_Mun_1_2019-06-22, DE_Bay_Mun_1_2019-09-02, DE_Bay_Mun_1_2020-06-25, DE_Bay_Mun_1_2020-09-05, DE_Bay_Mun_1_2021-06-25, DE_Bay_Mun_1_2021-09-04, DE_Bay_Wue_1_2020-07-18, DE_Bay_Wue_1_2020-09-23, DE_Bay_Wue_1_2021-07-27, DE_Bay_Wue_1_2021-10-18, DE_Bra_Ber_1_2021-07-24, DE_Bra_Ber_2_2021-07-24, DK_Mid_Kar_1_2014-09-01, DK_Mid_Kar_1_2014-11-25, DK_Mid_Kar_1_2016-06-08, DK_Mid_Kar_1_2016-09-15, DK_Mid_Kar_1_2016-11-22, DK_Mid_Kar_1_2017-08-08, DK_Mid_Kar_1_2018-06-30, DK_Mid_Kar_1_2018-10-05, DK_Mid_Kar_1_2019-07-09, DK_Mid_Kar_1_2019-10-01, DK_Mid_Kar_1_2020-07-31, DK_Mid_Kar_1_2020-10-31, EC_Pic_Con_1_2019-06-26, ES_Bal_Tom_1_2021-10-07, ES_Bar_Bar_1_2012-07-13, ES_Bar_Bar_1_2012-10-16, ES_Ciu_Man_1_2020-08-10, ES_Ciu_Tom_1_2015-09-17, ES_Ciu_Tom_1_2015-10-08, ES_Ciu_Tom_1_2016-09-02, ES_Ciu_Tom_1_2016-10-11, ES_Ciu_Tom_1_2017-10-04, ES_Ciu_Tom_1_2018-10-03, ES_Ciu_Tom_1_2020-09-30, ES_Gra_Ben_1_2016-10-08, ES_Gra_Ben_1_2017-10-05, ES_Gra_Cor_1_2015-08-08, ES_Gra_Cor_1_2017-07-28, ES_Gra_Gua_1_2015-09-12, ES_Gra_Pur_1_2016-08-30, ES_Ler_Gim_1_2014-08-13, ES_Ler_Gim_1_2014-10-20, ES_Ler_Gim_1_2015-06-28, ES_Ler_Gim_1_2015-10-22, ES_Ler_Gim_1_2016-08-25, ES_Ler_Gim_1_2016-10-21, ES_Ler_Gim_1_2017-07-24, ES_Ler_Gim_1_2017-10-14, ES_Ler_Gim_1_2018-08-25, ES_Ler_Gim_1_2018-10-26, ES_Ler_Gim_1_2019-08-25, ES_Ler_Gim_1_2020-10-26, ES_Ler_Gim_1_2021-08-31, ES_Mad_Yep_1_2018-11-06, ES_Tol_Vil_1_2018-10-07, ES_Zar_Ose_1_2018-09-20, ES_Zar_Pin_1_2018-10-10, FI_Cen_Jyv_1_2019-09-19, FI_Nor_Ves_1_2014-07-26, FI_Nor_Ves_1_2016-07-29, FI_Pir_Aka_1_2014-07-25, FI_Pir_Aka_1_2014-08-27, FI_Pir_Aka_1_2015-07-21, FI_Pir_Aka_1_2015-10-01, FI_Pir_Aka_1_2016-07-24, FI_Pir_Aka_1_2016-09-17, FI_Pir_Aka_1_2017-07-20, FI_Pir_Aka_1_2017-09-25, FI_Pir_Aka_1_2018-07-17, FI_Pir_Aka_1_2018-09-20, FI_Pir_Aka_1_2019-07-19, FI_Pir_Aka_1_2019-08-25, FI_Pir_Aka_1_2020-06-28, FI_Pir_Aka_1_2020-10-04, FI_Pir_Aka_1_2021-07-07, FI_Pir_Aka_1_2021-09-17, FR_Ain_Civ_1_2019-06-15, FR_Ain_Rey_1_2018-06-16, FR_Ain_Rey_1_2018-09-15, FR_Ain_Ver_1_2017-09-21, FR_Cot_Mar_1_2020-08-02, FR_Cot_Vie_1_2019-10-19, FR_Cot_Vie_1_2020-08-03, FR_Cot_Vie_1_2021-08-11, FR_Dro_Got_1_2014-07-08, FR_Dro_Got_1_2015-05-21, FR_Dro_Got_1_2015-09-09, FR_Dro_Got_1_2015-10-13, FR_Dro_Got_1_2016-06-13, FR_Ess_Vil_1_2014-08-18, FR_Ess_Vil_1_2014-10-27, FR_Ess_Vil_1_2015-08-10, FR_Ess_Vil_1_2015-10-14, FR_Ess_Vil_1_2016-08-12, FR_Ess_Vil_1_2017-08-24, FR_Ess_Vil_1_2017-10-17, FR_Eur_Sai_1_2018-09-15, FR_Gua_Des_1_2015-12-16, FR_Gua_Sai_1_2015-12-23, FR_Her_Sai_1_2020-11-12, FR_Her_Sai_1_2021-06-10, FR_Ill_Sai_1_2017-07-22, FR_Ill_Sai_1_2017-09-16, GB_Eas_Sus_1_2021-07-09, GB_Eas_Sus_1_2021-09-01, GB_Edi_Edi_1_2021-08-29, GB_Edi_Edi_1_2021-10-04, GB_Edi_Sou_1_2014-07-14, GB_Fif_Dai_1_2015-08-19, GB_Fif_Dai_1_2016-08-06, GB_Fif_Dai_1_2020-MM-DD, GB_Ken_Ken_1_2019-09-16, GB_Lei_Lut_1_2014-10-20, GB_Lei_Mar_1_2014-10-20, GB_Nor_Mar_1_2015-07-07, GB_Nor_Mar_1_2016-10-23, GB_Nor_Mar_1_2017-10-10, GB_Nor_Mar_2_2017-10-10, GB_Nor_Mar_3_2017-10-10, GB_Per_Dru_1_2020-09-07, GB_Per_Mut_1_2021-08-05, GB_She_She_1_2014-08-25, GB_She_She_1_2015-10-04, GR_Kri_Her_1_2020-07-13, GR_Kri_Ira_1_2017-11-06, GR_Kri_Ira_1_2018-10-11, GR_Kri_Ira_1_2019-MM-DD, GR_Kri_Ira_1_2021-10-20, HU_Pes_Pil_1_2018-07-04, HU_Pes_Pil_1_2018-10-30, HU_Pes_Pil_1_2020-08-17, HU_Sze_Sze_1_2016-08-28, IT_Sas_Rec_1_2018-10-18, IT_Tre_Mez_1_2015-09-29, IT_Tre_Mez_1_2015-10-10, IT_Tre_Mez_1_2016-08-24, IT_Tre_San_1_2019-10-01, IT_Tre_San_1_2021-06-28, IT_Tre_San_1_2021-10-01, MA_Ori_Ber_1_2017-07-10, MA_Ori_Ber_1_2017-09-15, MA_Ori_Ber_1_2018-07-16, MA_Ori_Ber_1_2019-09-11, MA_Ori_Ber_1_2020-09-21, MA_Ori_Nad_1_2016-07-21, MA_Ori_Nad_1_2016-10-04, MA_Tan_Lar_1_2021-09-06, ME_Her_Her_1_2019-09-19, ME_Her_Kam_1_2017-09-20, NL_Gro_Gro_1_2017-10-11, NL_Gro_Gro_1_2019-10-09, NL_Gro_Gro_1_2020-10-15, PA_Pan_Pan_1_2012-01-16, PL_Lub_Lub_1_2019-09-10, PL_Pom_Gda_1_2016-08-01, PL_War_Brz_1_2015-09-28, PL_War_Brz_1_2016-08-08, PL_War_Brz_1_2017-08-20, PT_Por_Rec_1_2014-09-26, PT_Por_Rec_1_2015-09-01, PT_Por_Rec_1_2016-10-01, RS_Mac_Zaj_1_2020-09-13, RS_Sre_Sla_1_2016-06-18, RS_Sre_Sla_1_2016-09-09, RS_Sre_Sla_1_2017-06-28, RS_Sre_Sla_1_2017-09-28, RS_Sre_Sla_1_2019-06-14, RS_Sre_Sla_1_2021-09-14, RS_Sre_Sla_1_2021-MM-DD, RS_Sre_Sta_1_2019-07-21, RS_Sre_Sta_1_2019-09-19, RS_Sre_Sta_1_2020-07-02, RS_Sre_Sta_1_2020-09-14, RS_Sre_Sta_1_2021-06-22, RS_Zaj_Kal_1_2016-06-30, RS_Zaj_Kal_1_2016-09-13, RU_Cri_Yal_1_2014-06-20, RU_Cri_Yal_1_2014-08-27, RU_Cri_Yal_1_2015-06-24, RU_Cri_Yal_1_2015-08-24, RU_Cri_Yal_1_2016-08-20, RU_Nov_Val_1_2014-08-17, RU_Nov_Val_1_2015-08-23, RU_Nov_Val_1_2015-10-05, RU_Nov_Val_1_2016-08-23, RU_Nov_Val_1_2016-09-29, RU_Nov_Val_1_2016-10-24, RU_Nov_Val_1_2017-08-25, RU_Nov_Val_1_2017-10-01, RU_Nov_Val_1_2018-08-28, RU_Tul_Tul_1_2015-09-20, RU_Vla_Ale_1_2015-09-15, RU_Vla_Ale_1_2016-10-15, RU_Vla_Ale_1_2017-08-15, RU_Vla_Ale_1_2018-09-09, RU_Vla_Ale_1_2018-10-13, SE_Ska_Lun_1_2014-07-31, SE_Ska_Lun_1_2015-08-08, SE_Ska_Lun_1_2015-08-24, TR_Ank_Yes_1_2014-08-31, TR_Ank_Yes_1_2014-10-23, TR_Ank_Yes_1_2015-05-01, TR_Ank_Yes_1_2015-06-01, TR_Ank_Yes_1_2015-07-28, TR_Ank_Yes_1_2015-08-27, TR_Ank_Yes_1_2015-09-17, TR_Ank_Yes_1_2015-10-15, TR_Ank_Yes_1_2016-05-26, TR_Ank_Yes_1_2016-06-25, TR_Ank_Yes_1_2016-07-27, TR_Ank_Yes_1_2016-08-24, TR_Ank_Yes_1_2016-09-27, TR_Ank_Yes_1_2016-10-13, TR_Ank_Yes_1_2017-06-07, TR_Ank_Yes_1_2017-06-30, TR_Ank_Yes_1_2017-08-30, TR_Ank_Yes_1_2017-09-26, TR_Ank_Yes_1_2017-10-13, TR_Ank_Yes_1_2018-05-19, TR_Ank_Yes_1_2018-06-25, TR_Ank_Yes_1_2018-07-28, TR_Ank_Yes_1_2018-08-27, TR_Ank_Yes_1_2018-09-27, TR_Ank_Yes_1_2018-10-12, TR_Ank_Yes_1_2019-06-26, TR_Ank_Yes_1_2019-08-14, TR_Ank_Yes_1_2019-09-17, TR_Ank_Yes_1_2019-10-10, TR_Ank_Yes_1_2020-05-21, TR_Ank_Yes_1_2020-06-26, TR_Ank_Yes_1_2020-07-13, TR_Ank_Yes_1_2020-08-18, TR_Ank_Yes_1_2020-09-16, TR_Ank_Yes_1_2020-10-14, TR_Ank_Yes_1_2021-05-19, TR_Ank_Yes_1_2021-06-25, TR_Ank_Yes_1_2021-07-27, TR_Ank_Yes_1_2021-08-19, TR_Ank_Yes_1_2021-09-20, TR_Ank_Yes_1_2021-10-16, UA_Che_Dmy_1_2021-07-17, UA_Che_Kan_1_2016-07-08, UA_Che_Uma_1_2014-10-01, UA_Che_Uma_1_2015-09-26, UA_Che_Uma_1_2016-09-11, UA_Che_Uma_1_2016-09-17, UA_Che_Uma_1_2017-09-16, UA_Che_Uma_1_2017-10-07, UA_Che_Uma_1_2018-09-21, UA_Che_Uma_1_2019-08-13, UA_Che_Uma_1_2019-10-14, UA_Che_Uma_1_2019-10-20, UA_Che_Uma_1_2020-08-19, UA_Che_Uma_1_2020-09-27, UA_Che_Uma_1_2021-09-19, UA_Che_Var_1_2014-08-18, UA_Che_Var_1_2015-08-25, UA_Che_Var_1_2016-08-26, UA_Che_Var_1_2018-09-03, UA_Che_Var_1_2019-09-14, UA_Che_Var_1_2020-10-11, UA_Che_Var_1_2021-09-26, UA_Don_Mar_1_2021-08-23, UA_Don_Mar_2_2021-08-23, UA_Don_Roz_1_2021-08-12, UA_Kha_Kha_1_2014-07-26, UA_Kha_Kha_1_2014-09-14, UA_Kha_Kha_1_2015-08-20, UA_Kha_Kha_1_2016-08-18, UA_Kha_Kha_1_2018-09-24, UA_Kha_Kha_1_2021-08-18, UA_Kie_Cho_1_2014-09-13, UA_Kie_Cho_1_2015-06-15, UA_Kie_Cho_1_2015-07-07, UA_Kie_Cho_1_2015-08-20, UA_Kie_Cho_1_2015-08-26, UA_Kie_Cho_1_2016-09-04, UA_Kie_Cho_1_2016-09-05, UA_Kie_Cho_1_2019-09-06, UA_Kie_Cho_2_2014-09-13, UA_Kie_Cho_2_2015-08-26, UA_Kie_Cho_2_2016-09-04, UA_Kie_Cho_3_2014-09-13, UA_Kie_Cho_3_2015-08-26, UA_Kie_Cho_4_2014-09-13, UA_Kie_Cho_4_2015-08-26, UA_Kie_Cho_5_2015-08-26, UA_Kie_Cho_6_2015-08-26, UA_Kie_Hle_1_2021-08-29, UA_Kie_Kho_1_2021-08-09, UA_Kie_Kop_1_2019-09-06, UA_Kie_Kyi_1_2014-08-09, UA_Kie_Kyi_1_2014-09-08, UA_Kie_Kyi_1_2014-10-11, UA_Kie_Kyi_1_2015-08-10, UA_Kie_Kyi_1_2016-08-06, UA_Kie_Kyi_1_2016-09-04, UA_Kie_Kyi_1_2016-10-03, UA_Kie_Kyi_1_2020-09-29, UA_Kie_Pri_1_2016-09-03, UA_Kie_Vys_1_2017-08-11, UA_Kie_Vys_1_2017-09-03, UA_Kie_Vys_1_2017-09-26, UA_Kie_Vys_1_2017-10-19, UA_Kie_Vys_1_2018-07-25, UA_Kie_Vys_1_2018-08-29, UA_Kie_Vys_1_2018-09-27, UA_Kie_Vys_1_2019-08-12, UA_Kie_Vys_1_2019-09-02, UA_Kie_Vys_1_2020-08-18, UA_Kie_Vys_1_2020-09-21, UA_Kie_Vys_1_2020-10-15, UA_Kie_Vys_1_2021-08-01, UA_Kie_Vys_1_2021-09-19, UA_Lvi_Dro_1_2014-08-24, UA_Lvi_Dro_1_2015-09-18, UA_Lvi_Dro_1_2016-09-12, UA_Myk_Ryb_1_2021-07-22, UA_Ode_Ode_1_2013-05-16, UA_Ode_Ode_1_2013-10-15, UA_Ode_Ode_1_2014-07-03, UA_Ode_Ode_1_2014-07-22, UA_Ode_Ode_1_2014-08-29, UA_Ode_Ode_1_2014-10-10, UA_Ode_Ode_1_2015-06-30, UA_Ode_Ode_1_2015-07-26, UA_Ode_Ode_1_2015-08-27, UA_Ode_Ode_1_2015-09-26, UA_Ode_Ode_1_2016-08-20, UA_Ode_Ode_1_2016-09-15, UA_Ode_Ode_1_2017-08-12, UA_Ode_Ode_1_2017-09-23, UA_Ode_Ode_1_2018-06-30, UA_Ode_Ode_1_2018-08-15, UA_Ode_Ode_1_2018-09-15, UA_Ode_Ode_1_2019-06-15, UA_Ode_Ode_1_2019-09-06, UA_Ode_Ode_1_2020-08-28, UA_Ode_Ode_1_2020-09-26, UA_Ode_Ode_1_2020-09-28, UA_Ode_Ode_1_2020-10-30, UA_Ode_Ode_1_2021-11-11, UA_Pol_Pyr_1_2014-08-20, UA_Pol_Pyr_1_2015-08-26, UA_Pol_Pyr_1_2016-08-23, UA_Pol_Pyr_1_2017-08-22, UA_Pol_Pyr_1_2017-09-03, UA_Pol_Pyr_1_2019-08-25, UA_Pol_Pyr_1_2019-09-06, UA_Pol_Pyr_1_2021-07-29, UA_Vol_Lut_1_2019-08-28, UA_Zap_Zap_1_2019-06-17, US_Cal_And_-1_2013-10-15, US_Cal_And_0_2013-10-15, US_Cal_And_10_2013-10-15, US_Cal_And_11_2013-10-15, US_Cal_And_12_2013-10-15, US_Cal_And_13_2013-10-15, US_Cal_And_14_2013-10-15, US_Cal_And_15_2013-10-15, US_Cal_And_16_2013-10-15, US_Cal_And_17_2013-10-15, US_Cal_And_18_2013-10-15, US_Cal_And_19_2013-10-15, US_Cal_And_1_2013-10-15, US_Cal_And_20_2013-10-15, US_Cal_And_2_2013-10-15, US_Cal_And_3_2013-10-15, US_Cal_And_4_2013-10-15, US_Cal_And_5_2013-10-15, US_Cal_And_6_2013-10-15, US_Cal_And_7_2013-10-15, US_Cal_And_8_2013-10-15, US_Cal_And_9_2013-10-15, US_Cal_Esp_1_2012-06-13, US_Cal_Esp_1_2012-08-22, US_Cal_Esp_1_2012-11-20, US_Cal_Esp_1_2013-05-07, US_Cal_Esp_1_2013-09-01, US_Cal_Pla_1_2012-08-25, US_Cal_Pla_1_2012-11-18, US_Cal_Pla_1_2013-08-30, US_Cal_Pla_1_2013-12-16, US_Cal_Sto_1_2012-10-01, US_Cal_Sto_1_2012-11-15, US_Cal_Sto_1_2013-09-03, US_Cal_Tuo_1_2012-10-10, US_Cal_Tuo_1_2012-11-17, US_Cal_Tuo_1_2013-05-14, US_Cal_Tuo_1_2013-08-31, US_Cal_Tuo_1_2013-12-08, US_Flo_Hom_1_2004-07-01, US_Flo_Hom_1_2010-07-15, US_Flo_Hom_1_2010-12-16, US_Flo_Hom_2_2004-07-01, US_Geo_Ath_1_2014-06-17, US_Geo_Ath_1_2014-10-15, US_Geo_Hah_1_2008-07-16, US_Ill_Urb_1_2015-07-11, US_Kan_Top_1_2014-06-22, US_Kan_Top_1_2014-10-22, US_Lou_Bat_0_2013-09-15, US_Lou_Bat_10_2013-09-15, US_Lou_Bat_1_2013-09-15, US_Lou_Bat_2_2013-09-15, US_Lou_Bat_3_2013-09-15, US_Lou_Bat_4_2013-09-15, US_Lou_Bat_5_2013-09-15, US_Lou_Bat_6_2013-09-15, US_Lou_Bat_7_2013-09-15, US_Lou_Bat_8_2013-09-15, US_Lou_Bat_9_2013-09-15, US_Lou_Wes_0_2013-09-15, US_Lou_Wes_10_2013-09-15, US_Lou_Wes_1_2013-09-15, US_Lou_Wes_2_2013-09-15, US_Lou_Wes_3_2013-09-15, US_Lou_Wes_4_2013-09-15, US_Lou_Wes_5_2013-09-15, US_Lou_Wes_6_2013-09-15, US_Lou_Wes_7_2013-09-15, US_Lou_Wes_8_2013-09-15, US_Lou_Wes_9_2013-09-15, US_Mai_Bow_1_2004-07-01, US_Mai_Bow_1_2009-10-15, US_Mai_Bow_2_2009-10-15, US_Mai_Wal_1_2004-07-01, US_Mas_Lan_1_2012-07-28, US_Mas_Lan_1_2012-10-02, US_Mas_Lan_1_2014-07-20, US_Mas_Lan_1_2014-10-20, US_Mic_Ben_1_2014-07-26, US_Mic_Ben_1_2014-11-05, US_New_Ith_1_2012-07-25, US_New_Ith_1_2012-09-23, US_Nor_Ral_2_2003-07-01, US_Pen_Lin_1_2009-07-15, US_Pen_Lin_1_2009-11-16, US_Pen_Lin_1_2010-07-15, US_Pen_Lin_1_2010-11-16, US_Pen_Lin_1_2011-07-15, US_Pen_Lin_1_2011-10-15, US_Pen_Lin_1_2011-11-16, US_Pen_Lin_1_2012-07-16, US_Pen_Lin_1_2012-09-13, US_Pen_Lin_1_2012-10-10, US_Pen_Lin_1_2013-06-15, US_Pen_Lin_1_2014-06-27, US_Pen_Lin_1_2014-10-17, US_Pen_Lin_1_2015-07-15, US_Pen_Lin_1_2015-10-15, US_Pen_Sta_1_2014-06-18, US_Pen_Sta_1_2014-10-16, US_Pen_Sta_1_2015-07-18, US_Rho_Pro_10_2015-06-11, US_Rho_Pro_11_2015-06-11, US_Rho_Pro_12_2015-06-11, US_Rho_Pro_1_2014-09-25, US_Rho_Pro_1_2015-06-11, US_Rho_Pro_2_2014-09-25, US_Rho_Pro_2_2015-06-11, US_Rho_Pro_3_2014-09-25, US_Rho_Pro_3_2015-06-11, US_Rho_Pro_4_2014-09-25, US_Rho_Pro_4_2015-06-11, US_Rho_Pro_5_2014-09-25, US_Rho_Pro_5_2015-06-11, US_Rho_Pro_6_2015-06-11, US_Rho_Pro_7_2015-06-11, US_Rho_Pro_8_2015-06-11, US_Rho_Pro_9_2015-06-11, US_Sou_Eut_1_2010-07-15, US_Tex_Lub_0_2013-09-15, US_Tex_Lub_10_2013-09-15, US_Tex_Lub_1_2013-09-15, US_Tex_Lub_2_2013-09-15, US_Tex_Lub_3_2013-09-15, US_Tex_Lub_4_2013-09-15, US_Tex_Lub_5_2013-09-15, US_Tex_Lub_6_2013-09-15, US_Tex_Lub_7_2013-09-15, US_Tex_Lub_8_2013-09-15, US_Tex_Lub_9_2013-09-15, US_Tex_Sto_0_2013-09-15, US_Tex_Sto_10_2013-09-15, US_Tex_Sto_1_2013-09-15, US_Tex_Sto_2_2013-09-15, US_Tex_Sto_3_2013-09-15, US_Tex_Sto_4_2013-09-15, US_Tex_Sto_5_2013-09-15, US_Tex_Sto_6_2013-09-15, US_Tex_Sto_7_2013-09-15, US_Tex_Sto_8_2013-09-15, US_Tex_Sto_9_2013-09-15, US_Vir_Cha_1_2012-07-18, US_Vir_Cha_1_2012-11-05, US_Vir_Cha_1_2014-06-25, US_Vir_Cha_1_2014-10-14, US_Vir_Cha_1_2015-07-01, US_Vir_Cha_1_2015-10-19, US_Vir_Cha_1_2016-06-24, US_Vir_Cha_1_2016-07-08, US_Vir_Cha_1_2016-07-22, US_Vir_Cha_1_2016-08-19, US_Vir_Cha_1_2016-09-02, US_Vir_Cha_1_2016-09-16, US_Vir_Cha_1_2016-10-03, US_Vir_Cha_1_2016-10-14, US_Vir_Cha_1_2016-10-28, US_Vir_Cha_1_2016-11-11, US_Vir_Cha_1_2016-12-03, US_Vir_Cha_1_2017-06-22, US_Vir_Cha_1_2017-07-07, US_Vir_Cha_1_2017-07-20, US_Vir_Cha_1_2017-08-03, US_Vir_Cha_1_2017-08-17, US_Vir_Cha_1_2017-08-31, US_Vir_Cha_1_2017-09-14, US_Vir_Cha_1_2017-09-28, US_Vir_Cha_1_2017-10-12, US_Vir_Cha_1_2017-10-26, US_Vir_Cha_1_2017-11-09, US_Vir_Cha_1_2017-11-24, US_Vir_Cha_1_2017-12-07, US_Vir_Cha_1_2018-06-28, US_Vir_Cha_1_2018-07-05, US_Vir_Cha_1_2018-07-12, US_Vir_Cha_1_2018-07-26, US_Vir_Cha_1_2018-08-09, US_Vir_Cha_1_2018-08-23, US_Vir_Cha_1_2018-09-06, US_Vir_Cha_1_2018-09-20, US_Vir_Cha_1_2018-10-04, US_Vir_Cha_1_2018-10-18, US_Vir_Cha_1_2018-10-25, US_Vir_Cha_1_2018-11-01, US_Vir_Cha_1_2018-11-29, US_Vir_Cha_1_2019-06-18, US_Vir_Cha_1_2019-08-14, US_Vir_Cha_1_2019-09-06, US_Vir_Cha_1_2020-07-03, US_Vir_Cha_1_2020-08-21, US_Vir_Cha_1_2020-09-30, US_Vir_Cha_1_2021-10-15, US_Was_Tac_1_2014-07-15, US_Wis_Cro_1_2012-06-10, US_Wis_Cro_1_2012-09-11, US_Wis_Cro_1_2012-10-20, US_Wis_Cro_1_2013-07-02, US_Wis_Cro_1_2013-09-22, US_Wis_Cro_1_2014-06-25, US_Wis_Cro_1_2014-09-18
Reference , 26430580, 28467432, 25147461, 25419368, 28548915, 28708741, 29708171, 29655133, 3530024, 3518822, 26487687, 15449510, 22632043, 24006787, 24462290, 24944532, 23882539, 24591684, 22557960, 28781728, 17302696, 29269813, 26272130, 24913557, 23639892, 25098411, 22921081, 25266250, 23677795, 24398254, 26326997, 3516537, 24070418, 24246533, 25001349, 20003244, 19666869, 27174874, 28651094, 17611443, 27132678, 23821798, 22305517, 20960562, 3497789, 25637420, 29192986, 21764883, 26137681, 23048450, 27465778, 26765044, 22444358, 25390784, 18452390, 3565795, 23500095, 24502501, 24748090, 27108559, 20259704, 22633029, 24048748, 27321897, 27283255, 25381437, 3529181, 26077862, 23264387, 24532273, 29195656, 19847506, 25850555, 17602351, 28963454, 26373037, 26073504, 3514587, 26363737, 22095694, 29401958, 22021202, 23368357, 27696498, 28831801, 26910535, 29033124, 23235753, 22674954, 21302538, 3502550, 27841622, 22044695, 22178573, 27319887, 27777462, 26088298, 18963172, 25965046, 26275005, 28010030, 29194207, 28848992, 28657271, 29629857, 29677657, 28768844, 3570303, 16037830, 14072533, 27637863, 23264028, 23394748, 20705625, 20970160, 28541836, 25012373, 26424594, 3510929, 15267661, 27282108, 27497126, 27859108, 18880591, 28014340, 24121046, 29072421, 26437945, 25634826, 28837832, 28645836, 28666662, 28406442, 26062200, 28561249, 28740052, 28427570, 28902369, 28704179, 28558436, 28658480, 29072844, 29203776, 29074377, 29016325, 29244034, 28698332, 28772529, 28876324, 28328734, 28260160, 29057381, 29002909, 29046873, 28744143, 29088947, 28792479, 28342310, 28825699, 28354130, 28878139, 29033933, 29191355, 27995566, 28528446, 28411150, 28990490, 28776106, 28677487, 28821876, 29163223, 28720659, 28638189, 28518747, 29362608, 28522069, 28833413, 29255840, 28550819, 28618258, 29146608, 28712841, 26962302, 28688409, 28432227, 28442521, 29423503, 29215822, 29188661, 28799780, 28801402, 28831258, 28696757, 28879385, 28879962, 29063515, 29445979, 28927961, 29582363, 28914762, 28645208, 28347652, 28540390, 28804947, 28949905, 28871289, 28803930, 29404962, 28915242, 28905950, 28422361, 28819882, 28378713, 28993612, 28440668, 28321958, 28415893, 28533071, 29526301, 29020182, 28951498, 29073627, 28916375, 28795524, 28783754, 28791601, 24269077, 29076547, 28777569, 28475685, 28977684, 28957823, 28358079, 28527529, 28027393, 28622243, 28543097, 28494942, 28984616, 28660607, 28701389, 28823788, 28930166, 28998625, 29041890, 28848485, 28723043, 29496519, 29056205, 29467476, 29013718, 28971196, 1871803, 29104156, 28712580, 28483351, 28661065, 28608905, 23033707, 28693290, 28658854, 28704238, 29044706, 24321203, 24363550, 28404955, 28462242, 28865261, 28648910, 28743076, 29628936, 28294147, 28241767, 28901705, 28803177, 29853442, 29403203, 29553674, 28952594, 28728175, 28816226, 26472019, 28892651, 29049210, 28709140, 28582281, 28850170, 28927096, 28667817, 28888419, 28729031, 29036730, 28766679, 28553732, 29533145, 23401762, 29015840, 29145346, 1600252, 29023452, 29520116, 28771322, 28612029, 28867004, 28855664, 29318411, 25685713, 28487360, 28914348, 29165062, 29234723, 28870353, 29195054, 29290565, 29376991, 29156074, 29149828, 28594275, 28658451, 28322475, 1604332, 28664564, 28757341, 29511417, 28710086, 28968841, 28666004, 25335610, 29148887, 28627526, 28973967, 29135820, 28481028, 27286266, 28422620, 29069756, 29197987, 29332304, 28764091, 28523707, 29087748, 28870255, 28939760, 28974767, 28702257, 28900416, 28975852, 28806944, 29222462, 28876449, 29150911, 28934571, 28654030, 29210623, 29294663, 24815305, 28863072, 29074681, 28969228, 29071725, 29512431, 29102659, 28971492, 28697671, 28846934, 29500818, 28993702, 28850702, 29407166, 28421999, 29107038, 28881938, 28688306, 25373642, 25740008, 28917901, 29214357, 28505962, 28649851, 27560403, 28626542, 29077552, 29169819, 28763018, 29053454, 28892068, 29193812, 29077423, 28833756, 28913309, 29086160, 29424614, 28018954, 28613486, 28690678, 28711253, 28686845, 28670680, 29119838, 29095739, 28813350, 28704765, 28977417, 29061533, 28794489, 28577619, 28655702, 29076039, 29227798, 29322533, 28572295, 28836962, 28937349, 28688409, 29225536, 29097075, 26562523, 28848032, 29233651, 29560032, 29131721, 29206674, 29265065, 29203015, 29117839, 29074544, 28915034, 29249221, 29247523, 29028261, 28738676, 29156155, 29041696, 28693477, 28599894, 28962416, 29047922, 29348528, 28985273, 26289327, 26466086, 28524474, 29061795, 28894878, 29097877, 26373724, 28744713, 29068560, 28647665, 29259215, 28985531, 28887243, 28638112, 29126571, 29022348, 29065402, 26428695, 29011219, 29147673, 28544732, 29088858, 28624963, 29000781, 28967667, 28759230, 28927037, 29102684, 26738939, 28943780, 29049608, 29164139, 29238760, 28815648, 28044285, 29001080, 29385534, 28768831, 28674447, 28666461, 28698657, 28736903, 28745721, 28840272, 28726710, 28425046, 29005351, 29284082, 28957206, 29289914, 28708375, 29154323, 29070341, 28916468, 28988962, 28959468, 29147412, 29130354, 29043481, 28810552, 29284589, 28671799, 28348952, 29272570, 29340082, 28978278, 29060322, 28893506, 28862502, 28709590, 29508909, 28617469, 28819471, 28992861, 28768198, 28783744, 29345283, 29108654, 28696203, 28896922, 28706892, 28874637, 28818037, 28812407, 29168208, 28906659, 28858332, 29190857, 3572930, 17029799, 4506902, 19399937, 13175568, 14899647, 19401813, 15809594, 17036820, 15905172, 5454200, 2178305, 8052245, 10639392, 27004821, 12424932, 25701047, 20759667, 27357529, 18426919, 29778326, 29378675, 29136679, 29255456, 28825586, 29110290, 28788280, 29214006, 28953567, 28894492, 29577396, 29517687, 28906619, 29307900, 28779553, 29045383, 28400515, 28997519, 28904417, 28071687, 21816266, 28601394, 28811527, 28390940, 28126944, 28747043, 28977064, 29086805, 3581241, 22807653, 16466316, 7854039, 28948281, 17467609, 24455901, 25204051, 21986996, 25389919, 29096058, 3528070, 8486816, 5503025, 21368847, 24550868, 25398942, 26280418, 8861221, 21347580, 27777077, 26735231, 29836415, 27308265, 24603532, 29910149, 28638151, 29003052, 28840837, 28553336, 28753625, 28782575, 29196070, 29671929, 28759848, 28008550, 28982814, 20238733, 28303252, 28390866, 22119756, 28374772, 28455850, 28975130, 29393671, 28554228, 28880912, 28536571, 28329840, 28537659, 29154391, 28824406, 28941122, 30019719, 29858322, 30032745, 27998482, 29874750, 27808706, 29933741, 28507872, 29924756, 28497146, 30032527, 28608218, 30185506, 29937261, 30047476, 29711904, 30143826, 28173154, 3546175, 28792753, 27895785, 25058619, 25019569, 23121097, 28821996, 25370542, 29441668, 28176512, 27664938, 3523639, 28389944, 28203766, 25167388, 24781653, 21015649, 24277132, 23179952, 22554243, 26377182, 26450049, 28477379, 29303470, 28636917, 28727838, 28766859, 28558017, 28790421, 28501951, 29071522, 28681001, 27972979, 28119245, 28047219, 28075786, 27540865, 27660172, 28062552, 27751759, 28129317, 27889251, 28764564, 27646674, 27798590, 28054565, 27907343, 28068471, 28205291, 28041628, 28486045, 28432299, 28635182, 28785102, 27910364, 27969148, 28007753, 27892142, 28010887, 28038357, 28560228, 28424696, 28803814, 27978066, 29350583, 28465870, 28698306, 29497405, 28820576, 17305305, 9773960, 28931808, 28343876, 29810263, 29054252, 29408253, 28039519, 29031969, 28571980, 28400710
Het , 2045366, 1708526, 2500143, 2414122, 1633534, 1586428, 1202298, 1390216, 209969, 213179, 649070, 330284, 545355, 623784, 633022, 672491, 600922, 647347, 550913, 893053, 384518, 1036570, 678919, 566641, 590719, 643652, 570470, 674826, 611206, 616909, 706545, 210992, 555246, 549867, 632298, 453791, 432833, 690552, 895491, 381914, 743178, 582121, 655319, 563423, 217208, 663285, 933842, 525942, 681154, 557979, 754590, 694853, 557504, 667438, 421113, 183259, 473975, 509941, 516089, 626990, 403077, 443693, 501276, 635388, 642811, 563932, 176146, 521745, 466960, 489835, 779484, 366289, 531451, 296321, 676621, 557230, 553923, 197042, 555455, 433385, 796938, 447807, 484703, 637607, 699466, 606453, 795284, 482733, 566545, 458864, 209404, 706113, 441439, 453220, 636469, 656731, 546235, 357165, 575445, 587598, 716457, 1282686, 1376758, 1083318, 1297644, 1079842, 1456568, 169343, 282963, 224633, 649299, 493973, 446880, 405065, 395616, 711597, 512655, 583118, 183005, 281641, 633197, 647932, 675667, 352359, 865353, 514959, 770167, 570740, 553455, 1692475, 1764144, 1362701, 1564565, 2055045, 1469948, 1575874, 1399202, 1320195, 1379983, 1492145, 1371786, 1652479, 1627355, 1653189, 1638699, 1555616, 1614356, 1587189, 1501367, 1697435, 1747309, 1556598, 1574201, 1239270, 1308025, 1259681, 941411, 882432, 1329277, 1501690, 1300946, 1232268, 1459067, 1595359, 1637761, 1644891, 1571129, 1680405, 1480532, 1504502, 1121424, 1484799, 1395180, 1467234, 1202400, 1427807, 1354975, 1271784, 1492919, 1417312, 1322310, 1439190, 734556, 1407557, 1493026, 1414050, 1203645, 1343798, 1409799, 1335032, 1342994, 1245012, 1325510, 1296296, 1334565, 1391429, 1313304, 1406559, 1315181, 1708642, 1441231, 1734619, 1415067, 1658636, 1559225, 1375329, 1265497, 1268786, 1527378, 1369819, 1519015, 1257121, 1598907, 1567372, 1540234, 1551803, 1673477, 1479727, 1240142, 1612977, 1299860, 1350180, 1403967, 1479488, 1349105, 1458070, 617309, 1261633, 1368341, 980447, 1317992, 1200913, 1569087, 1684516, 1450629, 1446281, 1529934, 1616654, 1559512, 1667453, 1391187, 1275063, 1306906, 1317602, 1213735, 1316100, 1335332, 1069130, 1378847, 1052992, 1331515, 1236983, 59832, 1128349, 1286562, 1442004, 1444652, 1387726, 3797749, 1422401, 1329094, 1302866, 1472188, 2914513, 2879829, 1658745, 1622198, 1651832, 1429784, 1472260, 1037141, 1685056, 1603388, 1175811, 1189788, 951835, 1217600, 1140520, 1307628, 1328214, 1363530, 1994402, 1295248, 1510972, 1345668, 1396526, 1560126, 1548439, 1527278, 1678480, 1403615, 1247156, 1391487, 1443556, 1070134, 3452785, 1492204, 974441, 64054, 1302754, 1134159, 1324094, 1444101, 1248150, 1296712, 1355487, 567773, 1448814, 1353196, 1343409, 1150991, 1358554, 1257529, 1161180, 1181856, 1227246, 1247112, 1346180, 1349717, 1583657, 53281, 1318988, 1375204, 1221813, 1368994, 1238429, 1792615, 515738, 1437490, 1531561, 1538699, 1275623, 1457198, 1170362, 1804159, 1209229, 1358198, 1341402, 1293013, 1389096, 1219645, 1275121, 1245506, 1200060, 1374188, 1301000, 1282957, 1345885, 1340447, 1460674, 1427176, 1436143, 1092256, 1454472, 1363030, 2780136, 1388539, 1329668, 1543985, 1494041, 1131844, 1352839, 1214765, 1298579, 1368241, 911709, 1542654, 1212848, 1026476, 1505061, 1482760, 1510833, 1591971, 2364583, 2199562, 1524761, 1289825, 1675381, 1646152, 874956, 1694229, 1526822, 1484618, 1635290, 1575003, 1657407, 1457898, 1270044, 1324051, 1336082, 1225441, 1017793, 1647948, 1451442, 1386372, 1393047, 1419605, 1423402, 1287536, 1285555, 1376860, 1472584, 1323895, 1439125, 1405895, 1479138, 1382594, 1364498, 1351711, 1207770, 1467031, 1431517, 1256543, 1426956, 1231130, 1517488, 1917083, 1523336, 1378639, 1329798, 1073581, 1056209, 1131693, 1252408, 1201918, 1191164, 1178762, 952719, 1270642, 1438424, 1520246, 1457384, 1171933, 1065829, 1367985, 1267210, 1355057, 1158333, 1301284, 2048915, 1939934, 1611569, 1480968, 1368825, 1355265, 2056499, 1465821, 1519288, 1417397, 1471335, 1532813, 1566808, 1296789, 1438365, 1538387, 1557192, 2012553, 1554479, 1424001, 1435227, 1531738, 1465022, 1366856, 1342042, 1300560, 1351502, 1318537, 1819317, 1566995, 1563423, 1515811, 1447230, 1278785, 1221792, 1351570, 1213098, 1331116, 1420687, 1360482, 1365966, 1431599, 1078890, 1230119, 1323625, 865848, 1358439, 1226186, 1354763, 1396821, 1477059, 1377930, 1302371, 1582487, 1603653, 1367126, 1298819, 1397545, 1414095, 1475104, 1435249, 1463373, 1478191, 1347336, 1366916, 911715, 1180976, 1212880, 1269505, 1313726, 854888, 1344432, 1262757, 1048381, 1182459, 1301967, 1128589, 1489838, 1505730, 1610682, 1310511, 1241878, 1271890, 1325036, 1332966, 1287277, 1324765, 1282137, 181461, 289350, 65173, 328374, 204670, 246300, 332383, 261185, 281838, 256050, 78149, 36210, 116335, 168487, 610836, 197411, 539688, 374429, 631760, 321609, 806222, 1601254, 1505631, 1499255, 1570950, 1667370, 1756388, 1514899, 1672808, 1598594, 1422849, 1473704, 1658218, 1457617, 1711802, 1521999, 1735479, 1553270, 945554, 1735160, 4060861, 922360, 1781147, 1975074, 1901399, 1779140, 1708531, 1629192, 154395, 501098, 307427, 93991, 639849, 289999, 449531, 535231, 407572, 421684, 652818, 198462, 144474, 85609, 432698, 569554, 569438, 725463, 138935, 434717, 735127, 631974, 1095338, 1788304, 2331807, 1073597, 1601270, 1541776, 1790742, 1894025, 1857963, 1906994, 1661372, 1408279, 1176383, 1957135, 1676439, 998502, 1733723, 1641378, 4402281, 1643208, 1699405, 1607098, 1265149, 1840533, 1661545, 1949729, 2107806, 1865280, 1683430, 1786265, 1767123, 951179, 1015335, 968579, 1133588, 1120721, 1194191, 1042930, 1310153, 1039307, 1338573, 1030798, 1315016, 1014292, 1018968, 1001682, 1140557, 964224, 1777599, 155639, 889514, 624367, 548155, 558894, 484333, 739395, 541223, 777681, 686200, 620900, 208482, 850321, 632437, 579941, 605496, 414851, 504502, 520619, 492403, 681752, 608256, 1683333, 1464554, 1703723, 1732230, 1778965, 1767878, 899787, 1577896, 1143241, 1459008, 1738719, 1677657, 1001585, 1674732, 1983146, 1948932, 1761338, 1919036, 1717340, 1790813, 1209753, 2036563, 1897565, 1690443, 1754512, 1658326, 1572171, 1688821, 1358420, 1630179, 1036752, 1260760, 1845510, 1787654, 1736530, 1827533, 1770355, 1723439, 1763949, 1826047, 1771056, 1829121, 1336875, 1499095, 1460816, 1146086, 1125860, 385450, 222198, 1103374, 2042369, 1074843, 1541537, 1537901, 2326786, 1697874, 1971243, 1980050
Hom , 26285, 24344, 28053, 27744, 28004, 28780, 37653, 31558, 2760, 2847, 87130, 62260, 70824, 65495, 63255, 62062, 62750, 63304, 60455, 61816, 62305, 42517, 66761, 92560, 64330, 69092, 61990, 62862, 62177, 66621, 72051, 3156, 64929, 68856, 63263, 53747, 56491, 71753, 56325, 52302, 56426, 59984, 40981, 43804, 2665, 64009, 63081, 59760, 57258, 59403, 62866, 75575, 59618, 56216, 52378, 4548, 68939, 72222, 67717, 63224, 58187, 71964, 70131, 65862, 63713, 64478, 5158, 81045, 71690, 75196, 66651, 65493, 77447, 67953, 74644, 72695, 73755, 3712, 72127, 66922, 58710, 59837, 62829, 70839, 70584, 64936, 56873, 61343, 44218, 48852, 2474, 50355, 63189, 57398, 57995, 59201, 69557, 56642, 59487, 58464, 56164, 38634, 26698, 37281, 61327, 94962, 32420, 5388, 55738, 52526, 70339, 64394, 70172, 66949, 65217, 65713, 63753, 72177, 3926, 47694, 75781, 64592, 62874, 59706, 61612, 69814, 59319, 64510, 67860, 15874, 14124, 31487, 27902, 29125, 32085, 29402, 26110, 33363, 29646, 27926, 31696, 26104, 25076, 30103, 28383, 30085, 26226, 22251, 24453, 23334, 21558, 24198, 23050, 33743, 38771, 40467, 65224, 67065, 29218, 25546, 35833, 42554, 29832, 26034, 24270, 24094, 26467, 22876, 27313, 27000, 41745, 26058, 29326, 27286, 39533, 28900, 31750, 33972, 27634, 25537, 32327, 27076, 72790, 28978, 26568, 29196, 50494, 38923, 33753, 33164, 30973, 36824, 30961, 33895, 31579, 28462, 51244, 31423, 31087, 22365, 28170, 22739, 30467, 23256, 24425, 29246, 31349, 33575, 27645, 30867, 28824, 29888, 25692, 26887, 28339, 27680, 23942, 29613, 48948, 24770, 32179, 31814, 30585, 28442, 28756, 30711, 66262, 30504, 27714, 51259, 29212, 43527, 27748, 24735, 33112, 29704, 28782, 25294, 25652, 23929, 32003, 34047, 35540, 32940, 40295, 35546, 34623, 45933, 34203, 44713, 32561, 39606, 65711, 37637, 31803, 27885, 27777, 30554, 22277, 31000, 38053, 37387, 28542, 23388, 22925, 24464, 24008, 23725, 28202, 25983, 45462, 27968, 34198, 36867, 36157, 49786, 36096, 40908, 32975, 31229, 30501, 27350, 39423, 24887, 30366, 31842, 22781, 20212, 26012, 22162, 28680, 32894, 27886, 26871, 40024, 36725, 33059, 53115, 36256, 35027, 39757, 28032, 31369, 41295, 38226, 36206, 61235, 33494, 40868, 40969, 40945, 29579, 32755, 47907, 42121, 39824, 39820, 31802, 30481, 22864, 58131, 36796, 33397, 38683, 30416, 42513, 18528, 72560, 33219, 28668, 29273, 38963, 28427, 51566, 22830, 41799, 36844, 37356, 31937, 27796, 40590, 39926, 40253, 40632, 34747, 37391, 39219, 33449, 36295, 33087, 33154, 32004, 46670, 32702, 35291, 26095, 40862, 43344, 29150, 30940, 60019, 36628, 39371, 34749, 36876, 93230, 29075, 44446, 71420, 29704, 26656, 29769, 28757, 31980, 30487, 31506, 39531, 27408, 29074, 64241, 25594, 29428, 31454, 27029, 28254, 26621, 30229, 37666, 35173, 39205, 42885, 70939, 20114, 30990, 27339, 33387, 31328, 25418, 42684, 42007, 33917, 31180, 47107, 34612, 33150, 32054, 28922, 34009, 38418, 44229, 26964, 31043, 46297, 30936, 40418, 31570, 34851, 32261, 36086, 37753, 47523, 48527, 45696, 40875, 42807, 43861, 44704, 55232, 39870, 32692, 32083, 32468, 43485, 46617, 35189, 38127, 34255, 40994, 31709, 28515, 29104, 28250, 31366, 34949, 35656, 29160, 32906, 29699, 32524, 30370, 29428, 29383, 32290, 31130, 29673, 29036, 30655, 28520, 31891, 32987, 29001, 32833, 34479, 35238, 35848, 34952, 36751, 34653, 29911, 29830, 30417, 32200, 37007, 35270, 35336, 40821, 36130, 33553, 35123, 33673, 33274, 47035, 39457, 36227, 56191, 36006, 40062, 35152, 34056, 32189, 35605, 36528, 18799, 19035, 34676, 37765, 34473, 33413, 33287, 34814, 33581, 32926, 37334, 35802, 59869, 42717, 42860, 38794, 37253, 60338, 35577, 38765, 49075, 42703, 38442, 53764, 29836, 31633, 28218, 36810, 39677, 37205, 36798, 37291, 32191, 35536, 25766, 2718, 48178, 13916, 53631, 35845, 41081, 47783, 41587, 45362, 43837, 18813, 9236, 25106, 32487, 54452, 35030, 50403, 48488, 55161, 47188, 55493, 18399, 18498, 18652, 16818, 15204, 11579, 18346, 14359, 16435, 17977, 18292, 14351, 18715, 13586, 16062, 12858, 15754, 52744, 18983, 18082, 52161, 16362, 13222, 15171, 13751, 15891, 17233, 6567, 78269, 67326, 53109, 103809, 76108, 121757, 91885, 91946, 118604, 106979, 2959, 31251, 21255, 56305, 58493, 66548, 61305, 30576, 57277, 55080, 63532, 36990, 14784, 28427, 38226, 16719, 18622, 15340, 12429, 13746, 15245, 19426, 26110, 29075, 13791, 16652, 22614, 17512, 17021, 9635, 17584, 14401, 18995, 25243, 14865, 15555, 13070, 10370, 15080, 18901, 15008, 15394, 52573, 50327, 57137, 31515, 36654, 29584, 46889, 26498, 38491, 25301, 42064, 33655, 43167, 46730, 43707, 38550, 49095, 16746, 8018, 93184, 98285, 86965, 88385, 86526, 90845, 90201, 89070, 90365, 94069, 2415, 54180, 107809, 60526, 57228, 57799, 91220, 61903, 56764, 55159, 62553, 15428, 23690, 15616, 16807, 14253, 14118, 47180, 22186, 38443, 26626, 14988, 17374, 40807, 16338, 12096, 12897, 15759, 14866, 17641, 15030, 32867, 14017, 12494, 16687, 14384, 17090, 18847, 15830, 30909, 21539, 47331, 30716, 14380, 14958, 15525, 14356, 15344, 16177, 14759, 13240, 14038, 13275, 30661, 21931, 24947, 37040, 37557, 67339, 47152, 50501, 10616, 39629, 17463, 18518, 9480, 16029, 13003, 12182
Missing , 4105761, 2407690, 4932335, 4746758, 2397539, 2284043, 1659870, 1531085, 28865239, 28873144, 5384105, 16765938, 9359770, 7911926, 7449425, 6928907, 8061781, 7305657, 9438664, 2871395, 14858473, 2259092, 5590182, 7035234, 8313051, 6796837, 9054451, 6604054, 8256814, 7526208, 5502399, 28877307, 7917399, 7742736, 6911082, 12097210, 12451799, 4670813, 3005082, 14562333, 4675710, 8144089, 9606175, 11040203, 28890330, 6243278, 2418083, 10257407, 5731899, 8942160, 4324758, 5072520, 9546512, 6493554, 13682111, 28854390, 8564983, 7523328, 7276096, 4809219, 11887024, 9459306, 7987837, 4584845, 4618213, 6598145, 28897507, 5927340, 8804955, 7510688, 2566201, 12328704, 6148539, 14641367, 2893273, 5605030, 5906810, 28892651, 5616673, 10011991, 2350386, 10079146, 8692103, 4203048, 3006141, 5026068, 2722711, 8828163, 9322275, 10797738, 28893564, 4009902, 10058669, 9918801, 4593641, 4114598, 5903902, 13231013, 6008014, 5686925, 3825341, 2092465, 2355544, 2830122, 1619164, 1755531, 2350160, 28862958, 16231461, 18258300, 4250491, 8785597, 8696192, 11430353, 11176999, 3288846, 7019211, 5528103, 28910132, 17010996, 4616906, 4398342, 4010343, 13315336, 3666687, 7902173, 2706085, 5534797, 6351851, 2061811, 2183888, 2547142, 2609083, 4461622, 2544710, 2262664, 2755110, 2352065, 2494184, 2529485, 2546030, 1856565, 1751785, 1850323, 1924585, 1778257, 2269078, 2226023, 2205848, 2558489, 2578965, 1969815, 2007832, 2288106, 2517053, 2218897, 2808878, 3316185, 2423798, 2726626, 2393074, 2299237, 1927738, 2991033, 2417515, 2527857, 2019906, 2128605, 2422660, 2254614, 2281600, 2376476, 2545297, 2594725, 2003451, 2629216, 2387854, 2046396, 2536620, 2546885, 2106747, 2428885, 4838344, 2483048, 2656171, 2722225, 1930350, 2009449, 1975779, 2440016, 2432623, 2494898, 2554764, 2398416, 2361886, 2124586, 1797465, 2242049, 1679361, 1962223, 2493383, 2502982, 2622068, 2121153, 2074437, 2332128, 2507216, 1900669, 2137727, 2301356, 2637792, 2501101, 2604680, 2020121, 2598751, 2706551, 2494680, 2565581, 1792601, 1950063, 2324455, 2152371, 2257065, 2304538, 2446377, 2327610, 7655344, 2239308, 2434368, 3100601, 2283104, 2405729, 2653078, 2371212, 3096858, 2509764, 2506179, 2471102, 2038212, 2256003, 2483413, 2475094, 2335380, 2258825, 2312072, 2407861, 2514994, 1996410, 2138737, 2042811, 2230198, 2360207, 30610646, 2337850, 2577047, 2654752, 2474498, 2580807, 5754259, 2461301, 2581991, 2563501, 2062556, 5348888, 5341688, 2519828, 2499544, 2067174, 2501096, 2366673, 1896453, 2600821, 2728639, 2493609, 2578870, 1752929, 1951093, 1872890, 2314795, 2520374, 2397735, 4114221, 2380670, 2022923, 2522818, 2597343, 2174915, 2112245, 2386885, 2018931, 2446666, 2291212, 2421940, 2583833, 1964689, 5716720, 2066889, 2435090, 30907430, 2246759, 1913960, 2484544, 2520493, 2451543, 2417390, 1897888, 6293271, 2638324, 2299580, 2058552, 2181333, 2349506, 2122654, 2108340, 2007024, 2184848, 2171232, 2635735, 2569343, 2678996, 30892248, 2587644, 2442050, 1836079, 2498496, 2358209, 2130845, 6684084, 1988396, 2420237, 2066053, 2157586, 2641339, 4099798, 2358383, 2287208, 2014963, 1896930, 2518951, 2667393, 2260009, 2422690, 2382473, 2392533, 2496800, 2369185, 2309964, 2421714, 2008788, 2237782, 1996751, 2205274, 2815036, 1910195, 1915008, 4986456, 2315519, 2160299, 2065629, 2011286, 1903698, 2115866, 2382364, 2576993, 2355941, 2102235, 2042561, 2499996, 2102930, 2651228, 1991538, 2185452, 2298958, 4837787, 4637935, 2133824, 2064279, 2399241, 2282915, 4108392, 2261627, 1974190, 1922101, 2182655, 1951281, 2031896, 1926053, 2222859, 2415012, 2319396, 2253506, 2094646, 2920976, 2512074, 2503603, 2470305, 2470214, 2488492, 2157934, 2184691, 2383865, 2399463, 2259573, 2072722, 2374458, 2519181, 2540774, 2133446, 1990065, 2033460, 2541702, 2308470, 2367803, 2461691, 2110908, 1961859, 4093535, 2204363, 1959616, 1680409, 2355167, 2296582, 2165538, 2111694, 2245428, 2298423, 2469492, 2350820, 2049957, 2108615, 2316987, 1961985, 2350878, 2802069, 2604924, 2340239, 2170758, 2060137, 2289726, 4241235, 4172868, 2443699, 2033863, 2309340, 2119194, 4148609, 2364552, 1990445, 2510406, 1847072, 2060220, 2124558, 2640801, 2011926, 2017584, 1956362, 4136089, 2013774, 2004427, 2595046, 1958395, 2485174, 2205876, 2263045, 2512354, 2294501, 2150020, 4015083, 2067306, 1965131, 1897625, 1889802, 2476552, 3306645, 2220006, 1968539, 2471915, 2479305, 2545926, 2509696, 2406216, 2736346, 2498144, 2521430, 3260907, 2208196, 2057662, 2260871, 1887201, 2390369, 2040134, 2198752, 2090238, 1996342, 2246722, 2123996, 2045620, 2117003, 2289049, 1853340, 2439239, 2747923, 1950752, 1865192, 2658130, 2323977, 2458746, 2437191, 2547423, 2183857, 2610514, 2486999, 2517675, 2614632, 2483839, 2080356, 1979664, 2374426, 2072170, 2553779, 2451800, 2480860, 2433751, 2069527, 2381865, 2389359, 2109232, 28850883, 15240665, 28022001, 12826050, 19191909, 17420964, 12826013, 16495626, 15243972, 16402933, 27056830, 30384241, 24414306, 21767626, 4937883, 19950619, 6316854, 11425408, 4563542, 13812276, 1967951, 1609664, 1947184, 1834629, 2194638, 1815128, 2051745, 1860741, 1967258, 2098471, 1589770, 1598309, 2028804, 1823760, 2103051, 2024548, 2459140, 2041449, 2705277, 2782162, 6712783, 3032077, 1998956, 2228756, 2564478, 2068058, 1906506, 1874762, 28865789, 9220972, 15766923, 24606853, 2916053, 14774276, 7580803, 6776825, 10121478, 6677785, 2752137, 28878501, 23945451, 26998103, 10750142, 7429077, 6573064, 5540806, 23577260, 10768418, 4040708, 5177255, 1639249, 3496639, 5644226, 1586020, 2351852, 2044542, 1961073, 2148202, 1982658, 1903178, 1731124, 1501674, 2642686, 2628516, 1932087, 11348143, 2553505, 2558727, 6076320, 2572428, 2438336, 2006769, 1923929, 2198366, 2049980, 2108622, 2159976, 2189973, 1751270, 1982313, 1884353, 1584521, 1684008, 1549531, 3444407, 1575867, 3575511, 1584432, 2763469, 1605438, 2746972, 1502603, 2651103, 1365027, 1605033, 1515127, 1716981, 1450847, 2640493, 28898160, 2832541, 3989555, 6914253, 6941144, 8916036, 2955756, 6606026, 2299573, 3654915, 4228085, 28873456, 3313547, 3663980, 6800137, 7163615, 11119693, 7735138, 8845518, 9504582, 5493899, 5487134, 2431852, 1816278, 2251736, 2131117, 2047915, 2267979, 2870604, 2505959, 2354786, 2441357, 2881306, 2793716, 3518381, 2841136, 3071885, 2985991, 2768343, 2922331, 2743694, 2912898, 2600808, 2910738, 2899343, 2846297, 2931753, 2864105, 2811683, 2861713, 2732618, 2523975, 2888727, 2531414, 2837738, 2836232, 2848184, 2873961, 2811406, 2830019, 2269056, 2344009, 2019084, 2787530, 1889873, 2621096, 2423923, 1927461, 2623999, 14849898, 22564682, 2522309, 2211131, 1683257, 1994740, 1643320, 2232207, 1862120, 2051766, 2215050

Codon changes

How to read this table:
- Rows are reference codons and columns are changed codons. E.g. Row 'AAA' column 'TAA' indicates how many 'AAA' codons have been replaced by 'TAA' codons.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

AAA AAC AAG AAT ACA ACC ACG ACT AGA AGC AGG AGT ATA ATC ATG ATT CAA CAC CAG CAT CCA CCC CCG CCT CGA CGC CGG CGT CTA CTC CTG CTT GAA GAC GAG GAT GCA GCC GCG GCT GGA GGC GGG GGT GTA GTC GTG GTT TAA TAC TAG TAT TCA TCC TCG TCT TGA TGC TGG TGT TTA TTC TTG TTT

AAA 72,593 44,314 108,892 48,177 14,191 94,010 19,955 12,362 60,897

AAC 31,925 9,415 92,014 221,232 45,406 247,844 96,344 26,297 137,092

AAG 111,543 14,127 63,511 158,362 39,781 189,463 97,706 31,255 250,355

AAT 102,014 44,151 44,052 107,809 21,977 119,249 32,335 15,572 107,065

ACA 16,109 39,421 24,288 73,004 3,728 22,703 57,834 19,406 69,536

ACC 33,174 77,224 20,928 85,373 11,049 45,294 197,498 50,070 166,057

ACG 22,497 64,423 15,899 44,896 4,627 35,594 124,603 27,449 120,369

ACT 13,832 59,142 21,680 21,415 4,730 16,071 52,400 15,828 69,107

AGA 10,774 2,383 33,146 12,382 17,630 9,577 11,034 4,489 18,285

AGC 40,167 13,022 38,991 7,709 74,322 33,618 111,243 24,457 70,082

AGG 13,880 2,803 25,901 3,532 15,691 12,471 22,416 6,010 29,284

AGT 22,602 6,439 94,250 36,453 58,826 16,329 23,574 11,249 51,816

ATA 43,349 7,780 13,815 21,006 8,873 54,432 20,482 10,028 36,662

ATC 69,314 20,001 110,718 68,895 8,857 97,792 113,209 28,467 94,560

ATG 135,734 23,003 44,139 58,063 7,873 48,429 87,846 22,931 115,544

ATT 106,136 14,653 73,442 107,238 36,807 22,991 36,470 14,796 66,977

CAA 32,070 84,323 39,061 94,907 19,815 13,438 91,130 8,253 25,343

CAC 28,389 24,616 6,509 56,403 67,069 26,307 118,762 4,541 27,439

CAG 58,365 113,537 18,448 57,666 73,814 30,813 156,397 13,292 74,066

CAT 22,079 56,475 27,110 36,037 26,249 9,859 50,048 2,892 26,029

CCA 31,025 29,952 59,521 33,849 87,744 5,361 37,573 8,324 33,447

CCC 41,151 50,068 72,459 22,316 70,290 7,322 49,165 10,444 40,806

CCG 36,721 36,822 78,678 19,216 46,332 5,162 43,608 8,388 42,526

CCT 14,877 13,832 49,367 19,414 20,599 2,927 13,534 3,488 17,355

CGA 24,323 20,986 2,452 63,427 20,012 34,935 18,342 3,550 17,818

CGC 34,825 46,633 5,541 47,130 19,179 71,935 34,499 5,615 29,169

CGG 23,481 22,640 2,590 38,116 12,020 28,474 19,479 2,687 23,098

CGT 19,132 19,604 2,358 78,697 33,331 73,413 13,701 2,456 22,712

CTA 16,985 37,632 6,054 10,853 23,882 28,002 40,330 4,614 25,611

CTC 24,640 45,273 11,791 65,822 36,954 23,049 55,375 5,584 19,785

CTG 65,552 208,839 32,771 67,506 155,523 36,501 90,700 17,917 130,827

CTT 15,817 49,712 7,820 28,179 63,949 21,688 30,131 3,473 13,537

GAA 49,781 9,125 112,327 61,252 140,780 57,644 17,932 59,445 40,555

GAC 50,749 8,020 33,240 11,918 92,800 225,453 37,050 112,477 39,934

GAG 81,625 18,959 126,378 22,538 78,534 162,563 38,497 117,038 80,386

GAT 68,486 9,537 138,039 65,498 129,598 130,018 23,688 71,153 65,963

GCA 32,198 5,976 21,333 43,394 26,549 74,369 5,771 32,423 25,471

GCC 91,614 13,355 64,979 82,626 28,374 124,526 18,860 82,822 70,208

GCG 34,958 5,606 26,611 49,380 16,799 40,827 6,722 42,134 28,112

GCT 36,850 5,976 22,924 70,629 37,347 77,230 7,539 27,015 33,918

GGA 39,820 6,329 36,743 9,005 83,240 35,743 68,525 40,072 33,841

GGC 66,172 7,903 53,968 13,977 69,802 22,230 108,315 53,018 44,849

GGG 10,812 1,918 11,517 2,793 18,976 7,456 15,751 13,767 11,648

GGT 37,863 4,265 24,619 5,861 112,472 53,134 121,887 19,839 37,896

GTA 17,000 3,038 41,447 8,712 16,319 17,876 19,720 29,709 12,492

GTC 33,234 5,291 76,617 24,859 154,789 30,633 19,719 49,959 17,557

GTG 54,540 10,554 241,920 58,782 121,323 86,876 27,635 74,911 45,614

GTT 27,317 4,990 118,430 22,117 91,193 70,009 23,626 48,393 15,599

TAA 3,162 399 474 1,511 641 2,669 517 646 2,228

TAC 84,380 15,786 38,190 25,393 3,586 72,016 49,138 16,924 103,869

TAG 2,754 406 943 1,599 172 957 496 425 1,547

TAT 63,533 8,210 14,104 47,517 29,045 20,296 18,917 7,363 41,406

TCA 31,114 9,000 41,288 13,877 27,463 20,517 50,374 1,514 19,807

TCC 76,648 25,247 67,738 42,733 55,369 22,669 75,636 8,871 42,185

TCG 69,878 17,071 100,910 31,577 72,665 23,683 50,672 4,818 42,289

TCT 28,493 8,558 41,798 13,180 39,863 18,626 14,185 3,443 12,611

TGA 3,272 483 718 1,529 153 2,059 398 1,243 829

TGC 89,821 15,426 26,731 28,457 4,087 20,302 3,991 56,093 22,663

TGG 60,524 9,433 23,587 20,573 2,565 14,164 3,032 19,440 19,438

TGT 41,045 5,969 12,496 10,657 1,990 37,531 21,945 28,491 8,146

TTA 29,401 8,423 13,566 22,029 3,289 3,987 5,087 10,292 19,581

TTC 158,086 27,060 103,610 73,753 16,020 65,590 41,994 7,734 101,097

TTG 119,262 46,531 83,006 115,758 14,479 19,299 57,207 8,996 36,014

TTT 94,536 14,916 50,980 93,301 10,394 36,574 62,627 36,348 13,701

Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

* ? A C D E F G H I K L M N P Q R S T V W Y

* 4,415 3,302 1,417 718 5,916 4,604 805 3,755 1,166 823 5,309

? 85

A 672,050 87,903 47,944 38,892 30,913 157,709 195,620 184,394

C 57,833 78,038 30,809 39,227 21,395 136,943 32,482 39,114

D 355,471 158,298 312,795 60,738 17,557 119,235 183,630 105,897

E 120,941 220,207 354,179 187,630 56,429 131,406 28,084 176,483

F 102,164 137,445 252,622 168,032 26,414 154,590 167,054

G 33,841 31,636 82,745 78,587 48,260 717,531 71,047 104,035 126,696 11,648

H 7,433 83,513 168,810 50,468 93,318 123,637 36,166 53,468

I 161,537 386,170 43,349 206,823 40,721 175,450 13,815 184,160 42,434 53,291

K 311,252 43,617 94,010 155,857 189,463 259,123 117,661 53,972 206,539

L 141,774 103,000 94,985 86,843 884,975 184,814 58,436 246,471 172,360 17,768 128,160 19,299

M 114,365 135,734 203,390 44,139 23,003 22,931

N 41,869 128,679 367,093 187,406 136,165 67,383 329,041 244,157

P 30,644 63,900 143,880 579,785 66,774 20,772 134,134 123,774

Q 99,409 21,545 255,344 90,435 247,527 93,629 152,598 44,251

R 36,103 51,881 24,807 66,237 9,577 24,654 86,021 12,471 12,941 43,626 640,206 123,956 5,186 52,382

S 46,968 251,734 134,212 54,796 35,706 49,947 62,096 62,769 59,876 334,593 582,497 225,594 4,818 55,913

T 112,753 84,068 38,606 35,594 47,006 432,335 8,355 440,848 547,693

V 114,470 195,047 283,367 33,156 383,624 77,551 81,979 54,540 499,066

W 34,737 22,472 23,587 19,438 69,957 2,565

Y 96,792 24,287 52,294 145,275 23,996 147,913 68,055 101,061

Variants by chromosome

		

		2L, Position,0,100000,200000,300000,400000,500000,600000,700000,800000,900000,1000000,1100000,1200000,1300000,1400000,1500000,1600000,1700000,1800000,1900000,2000000,2100000,2200000,2300000,2400000,2500000,2600000,2700000,2800000,2900000,3000000,3100000,3200000,3300000,3400000,3500000,3600000,3700000,3800000,3900000,4000000,4100000,4200000,4300000,4400000,4500000,4600000,4700000,4800000,4900000,5000000,5100000,5200000,5300000,5400000,5500000,5600000,5700000,5800000,5900000,6000000,6100000,6200000,6300000,6400000,6500000,6600000,6700000,6800000,6900000,7000000,7100000,7200000,7300000,7400000,7500000,7600000,7700000,7800000,7900000,8000000,8100000,8200000,8300000,8400000,8500000,8600000,8700000,8800000,8900000,9000000,9100000,9200000,9300000,9400000,9500000,9600000,9700000,9800000,9900000,10000000,10100000,10200000,10300000,10400000,10500000,10600000,10700000,10800000,10900000,11000000,11100000,11200000,11300000,11400000,11500000,11600000,11700000,11800000,11900000,12000000,12100000,12200000,12300000,12400000,12500000,12600000,12700000,12800000,12900000,13000000,13100000,13200000,13300000,13400000,13500000,13600000,13700000,13800000,13900000,14000000,14100000,14200000,14300000,14400000,14500000,14600000,14700000,14800000,14900000,15000000,15100000,15200000,15300000,15400000,15500000,15600000,15700000,15800000,15900000,16000000,16100000,16200000,16300000,16400000,16500000,16600000,16700000,16800000,16900000,17000000,17100000,17200000,17300000,17400000,17500000,17600000,17700000,17800000,17900000,18000000,18100000,18200000,18300000,18400000,18500000,18600000,18700000,18800000,18900000,19000000,19100000,19200000,19300000,19400000,19500000,19600000,19700000,19800000,19900000,20000000,20100000,20200000,20300000,20400000,20500000,20600000,20700000,20800000,20900000,21000000,21100000,21200000,21300000,21400000,21500000,21600000,21700000,21800000,21900000,22000000,22100000,22200000,22300000,22400000,22500000,22600000,22700000,22800000,22900000,23000000,23100000,23200000,23300000,23400000,23500000
2L,Count,27156,34341,36592,32554,37584,41415,34267,40281,41761,36512,39154,42781,37935,40745,40434,36958,32991,38435,34147,40245,38418,32475,37475,39326,36934,36781,38824,35436,40065,36573,39951,37081,32011,39039,40044,39902,35419,37660,39100,35672,33111,35934,43720,42564,41613,37851,32855,40511,38035,37299,39992,37286,39013,39092,37644,40415,39501,38308,35587,40253,41732,40363,40233,39589,34669,39385,40934,41800,36765,36541,38710,37492,37055,35946,37221,35280,40004,36273,36398,32109,34651,38350,37452,39287,36286,34733,35060,33874,37440,34797,33022,33934,33351,36555,32832,40127,39915,37144,36179,37816,39672,32727,34213,36456,39062,36757,37951,39663,35983,33363,36318,39476,35977,35945,35761,32252,36124,32054,35787,34692,37949,37326,29557,34890,34134,28739,37110,29017,33970,33190,37179,37288,36882,37207,30478,27817,29483,37156,36311,38582,34926,36963,36412,39400,34851,36941,30778,30404,31284,30208,35471,36648,37371,35968,36021,33929,18477,25355,32260,32577,32212,27336,33332,35162,34713,27326,32090,35371,34238,33000,31009,28475,29827,30239,35409,33984,29896,31248,29959,31062,30087,32908,32764,31749,31378,34533,36150,34979,37231,36704,37857,32941,37014,33156,35850,36452,25030,32539,35822,38645,33583,13219,22208,33720,25274,31652,33076,32965,30082,29971,27707,32666,26485,17604,1327,5108,16404,20898,30895,24569,21485,18856,7480,7886,6,9653,5849,7679,11,6690,8506,2673,1654,4265,1385,106

		

		2R, Position,0,100000,200000,300000,400000,500000,600000,700000,800000,900000,1000000,1100000,1200000,1300000,1400000,1500000,1600000,1700000,1800000,1900000,2000000,2100000,2200000,2300000,2400000,2500000,2600000,2700000,2800000,2900000,3000000,3100000,3200000,3300000,3400000,3500000,3600000,3700000,3800000,3900000,4000000,4100000,4200000,4300000,4400000,4500000,4600000,4700000,4800000,4900000,5000000,5100000,5200000,5300000,5400000,5500000,5600000,5700000,5800000,5900000,6000000,6100000,6200000,6300000,6400000,6500000,6600000,6700000,6800000,6900000,7000000,7100000,7200000,7300000,7400000,7500000,7600000,7700000,7800000,7900000,8000000,8100000,8200000,8300000,8400000,8500000,8600000,8700000,8800000,8900000,9000000,9100000,9200000,9300000,9400000,9500000,9600000,9700000,9800000,9900000,10000000,10100000,10200000,10300000,10400000,10500000,10600000,10700000,10800000,10900000,11000000,11100000,11200000,11300000,11400000,11500000,11600000,11700000,11800000,11900000,12000000,12100000,12200000,12300000,12400000,12500000,12600000,12700000,12800000,12900000,13000000,13100000,13200000,13300000,13400000,13500000,13600000,13700000,13800000,13900000,14000000,14100000,14200000,14300000,14400000,14500000,14600000,14700000,14800000,14900000,15000000,15100000,15200000,15300000,15400000,15500000,15600000,15700000,15800000,15900000,16000000,16100000,16200000,16300000,16400000,16500000,16600000,16700000,16800000,16900000,17000000,17100000,17200000,17300000,17400000,17500000,17600000,17700000,17800000,17900000,18000000,18100000,18200000,18300000,18400000,18500000,18600000,18700000,18800000,18900000,19000000,19100000,19200000,19300000,19400000,19500000,19600000,19700000,19800000,19900000,20000000,20100000,20200000,20300000,20400000,20500000,20600000,20700000,20800000,20900000,21000000,21100000,21200000,21300000,21400000,21500000,21600000,21700000,21800000,21900000,22000000,22100000,22200000,22300000,22400000,22500000,22600000,22700000,22800000,22900000,23000000,23100000,23200000,23300000,23400000,23500000,23600000,23700000,23800000,23900000,24000000,24100000,24200000,24300000,24400000,24500000,24600000,24700000,24800000,24900000,25000000,25100000,25200000
2R,Count,864,742,0,2259,4734,3795,4456,257,325,5706,3678,2618,3357,5012,4151,2941,3308,7026,2668,3549,4357,2484,1723,1485,746,5484,1845,3205,3186,5857,3091,6480,2530,3639,3067,6137,2745,1647,3938,4782,4676,4260,2438,4490,4374,7797,8794,8967,6207,8205,11792,9910,10220,10727,11976,6678,17644,25457,32707,27385,30009,26992,15470,284,2531,35862,34779,35907,38033,31857,33227,38179,31534,39117,35248,37201,36955,33680,28899,39357,36231,35143,37452,35279,37494,36996,37659,36395,39873,40188,37515,37600,37823,33927,33182,37909,37436,33856,36034,34381,34203,31902,35799,37964,34264,27252,28974,39070,41116,34673,31729,32194,39288,37519,34496,38336,35955,35003,38384,35150,35812,33517,31439,38482,38783,36049,38838,33199,30604,39389,38287,40763,41201,38877,36999,39541,37572,35662,41331,34933,32627,31925,37546,36908,33939,35474,37061,35865,34116,34444,30402,32821,37093,34353,38533,39965,39207,39384,39876,40249,39839,40096,42708,40692,38360,36245,37894,38011,36363,37011,40941,35376,34000,34175,37119,42270,40777,42393,33011,37585,36409,38946,39292,29473,38580,36744,40994,39892,38191,37209,37558,38195,38682,40760,37844,36119,33033,19331,38722,33187,39496,39491,41561,34209,38199,37459,41554,35305,40641,40753,41450,40865,39810,41760,36212,38884,43081,34335,35706,38520,38647,41229,40881,39090,41240,33664,40459,37872,43075,37932,40146,40366,39766,44251,40855,39541,40280,38094,41317,39707,42208,37967,39488,36068,43515,41968,38636,37616,39573,39694,36753,23067,13807

		

		3L, Position,0,100000,200000,300000,400000,500000,600000,700000,800000,900000,1000000,1100000,1200000,1300000,1400000,1500000,1600000,1700000,1800000,1900000,2000000,2100000,2200000,2300000,2400000,2500000,2600000,2700000,2800000,2900000,3000000,3100000,3200000,3300000,3400000,3500000,3600000,3700000,3800000,3900000,4000000,4100000,4200000,4300000,4400000,4500000,4600000,4700000,4800000,4900000,5000000,5100000,5200000,5300000,5400000,5500000,5600000,5700000,5800000,5900000,6000000,6100000,6200000,6300000,6400000,6500000,6600000,6700000,6800000,6900000,7000000,7100000,7200000,7300000,7400000,7500000,7600000,7700000,7800000,7900000,8000000,8100000,8200000,8300000,8400000,8500000,8600000,8700000,8800000,8900000,9000000,9100000,9200000,9300000,9400000,9500000,9600000,9700000,9800000,9900000,10000000,10100000,10200000,10300000,10400000,10500000,10600000,10700000,10800000,10900000,11000000,11100000,11200000,11300000,11400000,11500000,11600000,11700000,11800000,11900000,12000000,12100000,12200000,12300000,12400000,12500000,12600000,12700000,12800000,12900000,13000000,13100000,13200000,13300000,13400000,13500000,13600000,13700000,13800000,13900000,14000000,14100000,14200000,14300000,14400000,14500000,14600000,14700000,14800000,14900000,15000000,15100000,15200000,15300000,15400000,15500000,15600000,15700000,15800000,15900000,16000000,16100000,16200000,16300000,16400000,16500000,16600000,16700000,16800000,16900000,17000000,17100000,17200000,17300000,17400000,17500000,17600000,17700000,17800000,17900000,18000000,18100000,18200000,18300000,18400000,18500000,18600000,18700000,18800000,18900000,19000000,19100000,19200000,19300000,19400000,19500000,19600000,19700000,19800000,19900000,20000000,20100000,20200000,20300000,20400000,20500000,20600000,20700000,20800000,20900000,21000000,21100000,21200000,21300000,21400000,21500000,21600000,21700000,21800000,21900000,22000000,22100000,22200000,22300000,22400000,22500000,22600000,22700000,22800000,22900000,23000000,23100000,23200000,23300000,23400000,23500000,23600000,23700000,23800000,23900000,24000000,24100000,24200000,24300000,24400000,24500000,24600000,24700000,24800000,24900000,25000000,25100000,25200000,25300000,25400000,25500000,25600000,25700000,25800000,25900000,26000000,26100000,26200000,26300000,26400000,26500000,26600000,26700000,26800000,26900000,27000000,27100000,27200000,27300000,27400000,27500000,27600000,27700000,27800000,27900000,28000000,28100000
3L,Count,20546,30956,37182,39186,36739,38534,39958,38884,38229,36196,34546,34049,40143,39509,40251,40425,43508,43928,40907,41438,38683,40556,43729,42027,36779,39031,41229,36485,34400,32552,34429,40365,39668,41000,36196,38059,35649,34286,37328,37315,42256,41753,43127,35444,34137,37049,38122,37541,41232,36474,30683,29851,34299,34130,31929,37849,35345,39348,38597,40373,36552,35198,35308,38126,27059,38386,36460,34521,31358,37587,38654,40318,39160,38538,38620,37754,31199,34919,29618,33503,32594,40612,36201,38969,33772,40302,40402,37060,39816,39336,38011,28977,34260,35160,36335,31226,39372,39383,36818,31947,33645,37140,35188,31724,32662,30588,34621,33371,35696,37226,37927,36465,30523,34955,36252,29861,33935,35664,37249,36809,36477,36906,37029,38354,39581,39942,38177,37903,36969,32499,38678,38070,36935,37371,40200,30442,35199,35604,28931,36926,37949,36440,33262,32208,31316,33218,35343,33977,30848,34508,35683,37556,34879,35217,31581,33479,36064,37120,31771,33998,35336,33503,37752,39145,35005,33157,30859,39366,35408,36290,32360,35449,34536,38232,36374,30571,32775,33045,30524,35095,29674,33873,34102,32401,30982,26725,34566,25022,33014,36711,35457,32742,33968,34359,30117,35571,36119,10619,27982,31276,32666,31696,31918,29793,33844,31474,34592,32098,33946,35393,29940,31674,31847,25862,32266,32329,34254,31697,31693,31902,33078,32251,35717,37898,37504,29164,31035,26878,27461,23951,11891,6138,10194,5695,6631,4218,6264,7336,5187,3003,5890,5099,3700,4665,1308,3048,75,7917,2817,3324,2617,4937,2213,4300,4699,2370,3962,4539,2256,4271,2457,1963,3245,2985,1524,1076,2241,3300,2840,0,903,6484,4269,4901,3113,570,2573,1415,1256,3605,1677,4

		

		3R, Position,0,1000000,2000000,3000000,4000000,5000000,6000000,7000000,8000000,9000000,10000000,11000000,12000000,13000000,14000000,15000000,16000000,17000000,18000000,19000000,20000000,21000000,22000000,23000000,24000000,25000000,26000000,27000000,28000000,29000000,30000000,31000000,32000000
3R,Count,16015,28859,25024,27782,225273,327620,314124,317920,335572,339819,340936,354967,343687,340498,359238,363374,365639,359804,360528,366775,349092,356252,378656,378666,387405,364639,365522,377477,363535,400009,387923,375041,17314

		

		X, Position,0,100000,200000,300000,400000,500000,600000,700000,800000,900000,1000000,1100000,1200000,1300000,1400000,1500000,1600000,1700000,1800000,1900000,2000000,2100000,2200000,2300000,2400000,2500000,2600000,2700000,2800000,2900000,3000000,3100000,3200000,3300000,3400000,3500000,3600000,3700000,3800000,3900000,4000000,4100000,4200000,4300000,4400000,4500000,4600000,4700000,4800000,4900000,5000000,5100000,5200000,5300000,5400000,5500000,5600000,5700000,5800000,5900000,6000000,6100000,6200000,6300000,6400000,6500000,6600000,6700000,6800000,6900000,7000000,7100000,7200000,7300000,7400000,7500000,7600000,7700000,7800000,7900000,8000000,8100000,8200000,8300000,8400000,8500000,8600000,8700000,8800000,8900000,9000000,9100000,9200000,9300000,9400000,9500000,9600000,9700000,9800000,9900000,10000000,10100000,10200000,10300000,10400000,10500000,10600000,10700000,10800000,10900000,11000000,11100000,11200000,11300000,11400000,11500000,11600000,11700000,11800000,11900000,12000000,12100000,12200000,12300000,12400000,12500000,12600000,12700000,12800000,12900000,13000000,13100000,13200000,13300000,13400000,13500000,13600000,13700000,13800000,13900000,14000000,14100000,14200000,14300000,14400000,14500000,14600000,14700000,14800000,14900000,15000000,15100000,15200000,15300000,15400000,15500000,15600000,15700000,15800000,15900000,16000000,16100000,16200000,16300000,16400000,16500000,16600000,16700000,16800000,16900000,17000000,17100000,17200000,17300000,17400000,17500000,17600000,17700000,17800000,17900000,18000000,18100000,18200000,18300000,18400000,18500000,18600000,18700000,18800000,18900000,19000000,19100000,19200000,19300000,19400000,19500000,19600000,19700000,19800000,19900000,20000000,20100000,20200000,20300000,20400000,20500000,20600000,20700000,20800000,20900000,21000000,21100000,21200000,21300000,21400000,21500000,21600000,21700000,21800000,21900000,22000000,22100000,22200000,22300000,22400000,22500000,22600000,22700000,22800000,22900000,23000000,23100000,23200000,23300000,23400000,23500000
X,Count,0,9768,8687,14073,19642,19573,21938,23460,20986,24157,18650,22311,22706,22336,24824,19952,19590,20181,23581,19279,23414,23412,22750,19906,21327,22943,22181,23735,17926,22221,19285,18200,17410,17105,16957,20084,15354,13311,22915,19918,22091,21092,22225,22465,21327,23786,23331,19524,20838,17971,16839,19562,20117,20514,21852,22231,24414,23246,24084,21584,24713,20759,23664,22096,19085,20382,21838,21575,21856,21900,20290,20281,21497,20737,21301,21061,17904,22766,21673,23046,19336,24061,21436,20753,20373,22022,20778,20657,19550,18294,20708,21348,24696,22009,18644,20784,21404,20451,19820,21253,21318,17755,18642,20789,22319,20275,20802,20269,23152,22678,22521,20430,19036,20274,20666,16808,19552,17727,21666,20605,21476,19350,19324,19291,20392,21504,18798,18310,20287,19024,21647,20573,22199,21705,21169,21289,21948,23293,18714,17281,13929,19656,21645,19942,20998,21126,20877,20629,21491,20073,20959,22336,22097,22144,20395,23255,21267,24453,20467,20607,10457,20992,19740,19996,18898,19947,23101,21965,20975,20342,20313,18189,20673,20449,22167,20711,22414,20196,19547,18404,23355,19377,22564,22341,23059,22727,22816,22997,22451,18424,20721,20286,24307,19339,20797,24414,25031,21739,20959,12134,23390,15351,14356,20326,23683,20751,20528,20981,19283,18522,20286,17387,21300,22138,18737,11898,3893,1134,231,2220,410,482,452,626,12210,14378,14077,13841,15774,6935,9529,1920,1981,15,1475,280

Details by gene

Here you can find a tab-separated table.

Genome	BDGP6.86
Date	2026-03-26 14:19
SnpEff version	SnpEff 4.3t (build 2017-11-24 10:18), by Pablo Cingolani
Command line arguments	SnpEff -formatEff BDGP6.86 /project/berglandlab/DEST/snape/dest.PoolSeq.SNAPE.001.50.03Dec2024_DACtest.norep.ann.vcf.gz
Warnings	2,277,429
Errors	0
Number of lines (input file)	32,607,992
Number of variants (before filter)	37,947,871
Number of not variants (i.e. reference equals alternative)	0
Number of variants processed (i.e. after filter and non-variants)	37,947,871
Number of known variants (i.e. non-empty ID)	0 ( 0% )
Number of multi-allelic VCF entries (i.e. more than two alleles)	5,005,815
Number of effects	228,179,151
Genome total length	143,725,995
Genome effective length	132,532,477
Variant rate	1 variant every 3 bases

	AAA	AAC	AAG	AAT	ACA	ACC	ACG	ACT	AGA	AGC	AGG	AGT	ATA	ATC	ATG	ATT	CAA	CAC	CAG	CAT	CCA	CCC	CCG	CCT	CGA	CGC	CGG	CGT	CTA	CTC	CTG	CTT	GAA	GAC	GAG	GAT	GCA	GCC	GCG	GCT	GGA	GGC	GGG	GGT	GTA	GTC	GTG	GTT	TAA	TAC	TAG	TAT	TCA	TCC	TCG	TCT	TGA	TGC	TGG	TGT	TTA	TTC	TTG	TTT
AAA		72,593	44,314	108,892	48,177				14,191				94,010				19,955																12,362																60,897
AAC	31,925		9,415	92,014		221,232				45,406				247,844				96,344																26,297																137,092
AAG	111,543	14,127		63,511			158,362				39,781				189,463				97,706																31,255																250,355
AAT	102,014	44,151	44,052					107,809				21,977				119,249				32,335																15,572																107,065
ACA	16,109					39,421	24,288	73,004	3,728				22,703								57,834																19,406																69,536
ACC		33,174			77,224		20,928	85,373		11,049				45,294								197,498																50,070																166,057
ACG			22,497		64,423	15,899		44,896			4,627				35,594								124,603																27,449																120,369
ACT				13,832	59,142	21,680	21,415					4,730				16,071								52,400																15,828																69,107
AGA	10,774				2,383					33,146	12,382	17,630	9,577												11,034																4,489																18,285
AGC		40,167				13,022			38,991		7,709	74,322		33,618												111,243																24,457																70,082
AGG			13,880				2,803		25,901	3,532		15,691			12,471												22,416																6,010																29,284
AGT				22,602				6,439	94,250	36,453	58,826					16,329												23,574																11,249																51,816
ATA	43,349				7,780				13,815					21,006	8,873	54,432													20,482																10,028																36,662
ATC		69,314				20,001				110,718			68,895		8,857	97,792														113,209																28,467																94,560
ATG			135,734				23,003				44,139		58,063	7,873		48,429															87,846																22,931																115,544
ATT				106,136				14,653				73,442	107,238	36,807	22,991																	36,470																14,796																66,977
CAA	32,070																	84,323	39,061	94,907	19,815				13,438				91,130				8,253																25,343
CAC		28,389															24,616		6,509	56,403		67,069				26,307				118,762				4,541																27,439
CAG			58,365														113,537	18,448		57,666			73,814				30,813				156,397				13,292																74,066
CAT				22,079													56,475	27,110	36,037					26,249				9,859				50,048				2,892																26,029
CCA					31,025												29,952					59,521	33,849	87,744	5,361				37,573								8,324																33,447
CCC						41,151												50,068			72,459		22,316	70,290		7,322				49,165								10,444																40,806
CCG							36,721												36,822		78,678	19,216		46,332			5,162				43,608								8,388																42,526
CCT								14,877												13,832	49,367	19,414	20,599					2,927				13,534								3,488																17,355
CGA									24,323								20,986				2,452					63,427	20,012	34,935	18,342												3,550																17,818
CGC										34,825								46,633				5,541			47,130		19,179	71,935		34,499												5,615																29,169
CGG											23,481								22,640				2,590		38,116	12,020		28,474			19,479												2,687																23,098
CGT												19,132								19,604				2,358	78,697	33,331	73,413					13,701												2,456																22,712
CTA													16,985				37,632				6,054				10,853					23,882	28,002	40,330													4,614																25,611
CTC														24,640				45,273				11,791				65,822			36,954		23,049	55,375														5,584																19,785
CTG															65,552				208,839				32,771				67,506		155,523	36,501		90,700															17,917																130,827
CTT																15,817				49,712				7,820				28,179	63,949	21,688	30,131																	3,473																13,537
GAA	49,781																9,125																	112,327	61,252	140,780	57,644				17,932				59,445				40,555
GAC		50,749																8,020															33,240		11,918	92,800		225,453				37,050				112,477				39,934
GAG			81,625																18,959														126,378	22,538		78,534			162,563				38,497				117,038				80,386
GAT				68,486																9,537													138,039	65,498	129,598					130,018				23,688				71,153				65,963
GCA					32,198																5,976												21,333					43,394	26,549	74,369	5,771				32,423								25,471
GCC						91,614																13,355												64,979			82,626		28,374	124,526		18,860				82,822								70,208
GCG							34,958																5,606												26,611		49,380	16,799		40,827			6,722				42,134								28,112
GCT								36,850																5,976												22,924	70,629	37,347	77,230					7,539				27,015								33,918
GGA									39,820																6,329								36,743				9,005					83,240	35,743	68,525	40,072												33,841
GGC										66,172																7,903								53,968				13,977			69,802		22,230	108,315		53,018												44,849
GGG											10,812																1,918								11,517				2,793		18,976	7,456		15,751			13,767												11,648
GGT												37,863																4,265								24,619				5,861	112,472	53,134	121,887					19,839												37,896
GTA													17,000																3,038				41,447				8,712				16,319					17,876	19,720	29,709													12,492
GTC														33,234																5,291				76,617				24,859				154,789			30,633		19,719	49,959														17,557
GTG															54,540																10,554				241,920				58,782				121,323		86,876	27,635		74,911															45,614
GTT																27,317																4,990				118,430				22,117				91,193	70,009	23,626	48,393																	15,599
TAA	3,162																399																474																	1,511	641	2,669	517				646				2,228
TAC		84,380																15,786																38,190															25,393		3,586	72,016		49,138				16,924				103,869
TAG			2,754																406																943														1,599	172		957			496				425				1,547
TAT				63,533																8,210																14,104													47,517	29,045	20,296					18,917				7,363				41,406
TCA					31,114																9,000																41,288												13,877					27,463	20,517	50,374	1,514				19,807
TCC						76,648																25,247																67,738												42,733			55,369		22,669	75,636		8,871				42,185
TCG							69,878																17,071																100,910												31,577		72,665	23,683		50,672			4,818				42,289
TCT								28,493																8,558																41,798												13,180	39,863	18,626	14,185					3,443				12,611
TGA									3,272																483																718								1,529				153					2,059	398	1,243	829
TGC										89,821																15,426																26,731								28,457				4,087			20,302		3,991	56,093		22,663
TGG											60,524																9,433																23,587								20,573				2,565		14,164	3,032		19,440			19,438
TGT												41,045																5,969																12,496								10,657				1,990	37,531	21,945	28,491					8,146
TTA													29,401																8,423																13,566				22,029				3,289				3,987					5,087	10,292	19,581
TTC														158,086																27,060																103,610				73,753				16,020				65,590			41,994		7,734	101,097
TTG															119,262																46,531																83,006				115,758				14,479				19,299		57,207	8,996		36,014
TTT																94,536																14,916																50,980				93,301				10,394				36,574	62,627	36,348	13,701

	*	?	A	C	D	E	F	G	H	I	K	L	M	N	P	Q	R	S	T	V	W	Y
*	4,415			3,302		1,417		718			5,916	4,604				805	3,755	1,166			823	5,309
?		85
A			672,050		87,903	47,944		38,892							30,913			157,709	195,620	184,394
C	57,833			78,038			30,809	39,227									21,395	136,943			32,482	39,114
D			355,471		158,298	312,795		60,738	17,557					119,235						183,630		105,897
E	120,941		220,207		354,179	187,630		56,429			131,406					28,084				176,483
F				102,164			137,445			252,622		168,032						26,414		154,590		167,054
G	33,841		31,636	82,745	78,587	48,260		717,531									71,047	104,035		126,696	11,648
H					7,433				83,513			168,810		50,468	93,318	123,637	36,166					53,468
I							161,537			386,170	43,349	206,823	40,721	175,450			13,815	184,160	42,434	53,291
K	311,252					43,617				94,010	155,857		189,463	259,123		117,661	53,972		206,539
L	141,774						103,000		94,985	86,843		884,975	184,814		58,436	246,471	172,360	17,768		128,160	19,299
M										114,365	135,734	203,390					44,139		23,003	22,931
N					41,869				128,679	367,093	187,406			136,165				67,383	329,041			244,157
P			30,644						63,900			143,880			579,785	66,774	20,772	134,134	123,774
Q	99,409					21,545			255,344		90,435	247,527			93,629	152,598	44,251
R	36,103			51,881				24,807	66,237	9,577	24,654	86,021	12,471		12,941	43,626	640,206	123,956	5,186		52,382
S	46,968		251,734	134,212			54,796	35,706		49,947		62,096		62,769	59,876		334,593	582,497	225,594		4,818	55,913
T			112,753							84,068	38,606		35,594	47,006	432,335		8,355	440,848	547,693
V			114,470		195,047	283,367	33,156	383,624		77,551		81,979	54,540							499,066
W	34,737			22,472				23,587				19,438					69,957	2,565
Y	96,792			24,287	52,294		145,275		23,996					147,913				68,055				101,061