Read 1: /scratch/tae4sa/PRJNA315172/SRR6240761_1.fastq.gz Read 2: /scratch/tae4sa/PRJNA315172/SRR6240761_2.fastq.gz Sample name: ExpEvo_PRJNA315172_FC_1_1998-MM-DD Output directory: /standard/BerglandTeach/mapping_output Number of cores used: 11 Max cov: 0.95 Min cov 4 base-quality-threshold 25 illumina-quality-coding 1.8 min-indel 5 Read 1: /scratch/tae4sa/PRJNA315172/SRR6240761_1.fastq.gz Read 2: /scratch/tae4sa/PRJNA315172/SRR6240761_2.fastq.gz Sample name: ExpEvo_PRJNA315172_FC_1_1998-MM-DD Output directory: /standard/BerglandTeach/mapping_output Number of cores used: 11 Max cov: 0.95 Min cov 4 base-quality-threshold 25 illumina-quality-coding 1.8 min-indel 5 Read 1: /scratch/tae4sa/PRJNA315172/SRR6240761_1.fastq.gz Read 2: /scratch/tae4sa/PRJNA315172/SRR6240761_2.fastq.gz Sample name: ExpEvo_PRJNA315172_FC_1_1998-MM-DD Output directory: /standard/BerglandTeach/mapping_output Number of cores used: 11 Max cov: 0.95 Min cov 4 base-quality-threshold 25 illumina-quality-coding 1.8 min-indel 5