Read 1: /scratch/pzs2vx/PRJEB5713/ERR442898_1.fastq.gz
Read 2: /scratch/pzs2vx/PRJEB5713/ERR442898_2.fastq.gz
Sample name: ExpEvo_PRJEB5713_VSP_1_2014_MM_DD
Output directory: /standard/BerglandTeach/mapping_output
Number of cores used: 11
Max cov: 0.95
Min cov 4
base-quality-threshold 25
illumina-quality-coding 1.8
min-indel 5
Read 1: /scratch/pzs2vx/PRJEB5713/ERR442898_1.fastq.gz
Read 2: /scratch/pzs2vx/PRJEB5713/ERR442898_2.fastq.gz
Sample name: ExpEvo_PRJEB5713_VSP_1_2014_MM_DD
Output directory: /standard/BerglandTeach/mapping_output
Number of cores used: 11
Max cov: 0.95
Min cov 4
base-quality-threshold 25
illumina-quality-coding 1.8
min-indel 5