Read 1: /scratch/aob2x/dest/fastq/SRS1577413_1.fastq.gz
Read 2: /scratch/aob2x/dest/fastq/SRS1577413_2.fastq.gz
Sample name: PA_li_15_spring
Output directory: /project/berglandlab/DEST/dest_mapped/pipeline_output/
Number of cores used: 16
Max cov: 0.95
Min cov 10
base-quality-threshold 15
illumina-quality-coding 1.8
min-indel 5
Maxsnape 0.9
theta:  0.005
D:  0.01
priortype: informative
Read 1: /scratch/aob2x/fastq/SRX1968328_1.fastq.gz
Read 2: /scratch/aob2x/fastq/SRX1968328_2.fastq.gz
Sample name: PA_li_15_spring
Output directory: /project/berglandlab/DEST/dest_mapped/pipeline_output
Number of cores used: 10
Max cov: 0.95
Min cov 4
base-quality-threshold 25
illumina-quality-coding 1.8
min-indel 5
Maxsnape 0.9
theta:  0.005
D:  0.01
priortype: informative
Maxsnape 0.9
theta:  0.005
D:  0.01
priortype: informative
Maxsnape 0.9
theta:  0.005
D:  0.01
priortype: informative
Maxsnape 0.9
theta:  0.005
D:  0.01
priortype: informative