Read 1: /scratch/yey2sn/DEST_v1_reads/SRR3939044/SRR3939044_1.fastq.gz
Read 2: /scratch/yey2sn/DEST_v1_reads/SRR3939044/SRR3939044_2.fastq.gz
Sample name: US_Cal_Tuo_1_2013-05-14
Output directory: /project/berglandlab/DEST/dest_mapped/DESTv1
Number of cores used: 7
Max cov: 0.95
Min cov 4
base-quality-threshold 25
illumina-quality-coding 1.8
min-indel 5
Maxsnape 0.9
theta:  0.005
D:  0.01
priortype: informative